RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 TTF2Q9UNY4 1162 aaKnown RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 COA3Q9Y2R0 106 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 PCDHB4Q9Y5E5 795 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 EPN1Q9Y6I3 576 aaPredicted RBP0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 XDHP47989 1333 aa0.64□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRIOBPQ9H2D6 2365 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 NPHP3-ACAD11A0A0J9YXS1 232 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 UNC119BA6NIH7 251 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 KRTAP4-16G5E9R7 235 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC26A4O43511 780 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 NDUFB5O43674 189 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 ORC4O43929 436 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 FZD6O60353 706 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 NDUFA10O95299 355 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 ESRRBO95718 433 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 KNG1P01042 644 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 CHGBP05060 677 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 THBDP07204 575 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 ITGAMP11215 1152 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 IFNGR1P15260 489 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 RHCEP18577 417 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 GPD1P21695 349 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 POLD1P28340 1107 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 FOXI1Q12951 378 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 LAMB3Q13751 1172 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 ERV3-1Q14264 604 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARSHQ5FYA8 562 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 MORN5Q5VZ52 161 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 DPP8Q6V1X1 898 aaPredicted RBP0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 BRAPQ7Z569 592 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 GPR135Q8IZ08 494 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 HASPINQ8TF76 798 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 GLMNQ92990 594 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 CALR3Q96L12 384 aaKnown RBP0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 NIF3L1Q9GZT8 377 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 EPC1Q9H2F5 836 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 MSL2Q9HCI7 577 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRPM5Q9NZQ8 1165 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 REV1Q9UBZ9 1251 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 TIMELESSQ9UNS1 1208 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 MTMR7Q9Y216 660 aa0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 SF3B6Q9Y3B4 125 aaKnown RBP0.63□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRBV23OR9-2A0A075B6M9 112 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 A0A1B0GVY2 172 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 DRGXA6NNA5 263 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 LACTBL1A8MY62 500 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 MATN2O00339 956 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 RGS13O14921 159 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 PROP1O75360 226 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 IPO13O94829 963 aaKnown RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 TBX6O95947 436 aaPredicted RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 PRKCGP05129 697 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 PAMP19021 973 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 HK1P19367 917 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 KRT2P35908 639 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 ADCY8P40145 1251 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CDKN2AP42771 156 aaKnown RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 NR4A2P43354 598 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CACNA2D1P54289 1103 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 BLOC1S1P78537 153 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 RPL6Q02878 288 aaKnown RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 MAP3K12Q12852 859 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC10A2Q12908 348 aaPredicted RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 DUSP8Q13202 625 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 RIN1Q13671 783 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 AUHQ13825 339 aaKnown RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPP2R5DQ14738 602 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 LLGL1Q15334 1064 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 NEUROD2Q15784 382 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 SKIDA1Q1XH10 827 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 TMEM119Q4V9L6 283 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CFAP70Q5T0N1 1121 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 EEF1DP3Q658K8 133 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 OTOP2Q7RTS6 562 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 FILIP1Q7Z7B0 1213 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CNGA4Q8IV77 575 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 ADHFE1Q8IWW8 467 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CCDC144CPQ8IYA2 1237 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 ELOA2Q8IYF1 753 aaPredicted RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 ARRDC4Q8NCT1 418 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 KREMEN2Q8NCW0 462 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 BRF1Q92994 677 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRMT2BQ96GJ1 504 aaKnown RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 CHAMP1Q96JM3 812 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 FCRL3Q96P31 734 aaPredicted RBP0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 MTA3Q9BTC8 594 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 KATNBL1Q9H079 304 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 TMEM260Q9NX78 707 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRPS1Q9UHF7 1281 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 RCAN3Q9UKA8 241 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 PPM1HQ9ULR3 514 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 HS3ST4Q9Y661 456 aa0.62□□□□□ -2.31
SNORA40.17-201ENST00000517256 H3BNX3 289 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 STXBP3O00186 592 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 RNASET2O00584 256 aaKnown RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 HGSO14964 777 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 RTL8CO15255 209 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 SEC24DO94855 1032 aaPredicted RBP0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 HLA-DOAP06340 250 aa0.61□□□□□ -2.31
SNORA40.17-201ENST00000517256 COL6A1P12109 1028 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms