RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 GFPT1Q06210 699 aaPredicted RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 DHX9Q08211 1270 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 C2orf54Q08AI8 447 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 STK4Q13043 487 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 IFT88Q13099 833 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 AP3B2Q13367 1082 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MYBPC2Q14324 1141 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ITIH4Q14624 930 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PWP2Q15269 919 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPP1R7Q15435 360 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZKSCAN8Q15776 578 aaPredicted RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ENOX2Q16206 610 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 AOC3Q16853 763 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TXNRD1Q16881 649 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF827Q17R98 1081 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 KRT71Q3SY84 523 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 WDR44Q5JSH3 913 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZFYVE27Q5T4F4 411 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 LIN9Q5TKA1 542 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 FYB2Q5VWT5 728 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHADLQ6NUI6 762 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTI2Q6NXR4 508 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ALKBH5Q6P6C2 394 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PDXDC1Q6P996 788 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MOXD1Q6UVY6 613 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PI16Q6UXB8 463 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPP1R21Q6ZMI0 780 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAMSTRQ6ZN01 415 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP49Q70CQ1 688 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRMT10CQ7L0Y3 403 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CYFIP1Q7L576 1253 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 OTUD6AQ7L8S5 288 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 GSTA5Q7RTV2 222 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 NLRP14Q86W24 1093 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CREG2Q8IUH2 290 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PARP9Q8IXQ6 854 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 LMNTD2Q8IXW0 634 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC105Q8IYK2 499 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 IQCKQ8N0W5 287 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGAP24Q8N264 748 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 SAMD3Q8N6K7 520 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TEX9Q8N6V9 391 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 VGLL2Q8N8G2 317 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 C4orf32Q8N8J7 132 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP38Q8NB14 1042 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPFIBP2Q8ND30 876 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAGEC3Q8TD91 643 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 AENQ8WTP8 325 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TGFBRAP1Q8WUH2 860 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PTCD2Q8WV60 388 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAD54LQ92698 747 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TEKT1Q969V4 418 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAGOHBQ96A72 148 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CHMP6Q96FZ7 201 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM163AQ96GL9 167 aaPredicted RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 GDAP1L1Q96MZ0 367 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 RPS6KC1Q96S38 1066 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PNKPQ96T60 521 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 NCAPGQ9BPX3 1015 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM47Q9BQJ4 181 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 FERMT1Q9BQL6 677 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PAGR1Q9BTK6 254 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TIPINQ9BVW5 301 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MRIQ9BWK5 157 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 PRR14Q9BWN1 585 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 LSM14BQ9BX40 385 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 STK33Q9BYT3 514 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 WDR11Q9BZH6 1224 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 FOXP3Q9BZS1 431 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC113Q9H0I3 377 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 EPC1Q9H2F5 836 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 VCXQ9H320 206 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 RIOX1Q9H6W3 641 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 SH2D4AQ9H788 454 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 KANSL2Q9H9L4 492 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMBIM4Q9HC24 238 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGEF10LQ9HCE6 1279 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MRPL47Q9HD33 250 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 KCNK9Q9NPC2 374 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 A1CFQ9NQ94 594 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEC31BQ9NQW1 1179 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 GDF3Q9NR23 364 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 INTS9Q9NV88 658 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEPT11Q9NVA2 429 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAP3K20Q9NYL2 800 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMOD2Q9NZR1 351 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 CTTNBP2NLQ9P2B4 639 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLHL14Q9P2G3 628 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 LARSQ9P2J5 1176 aaKnown RBP2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 HDAC6Q9UBN7 1215 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 NARFQ9UHQ1 456 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 BCAP29Q9UHQ4 241 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAD2L2Q9UI95 211 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 GGA1Q9UJY5 639 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 FBXL5Q9UKA1 691 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 ODF2LQ9ULJ1 636 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 NFU1Q9UMS0 254 aa2.24□□□□□ -2.05
RNU1-40P-201ENST00000516816 KIAA1024Q9UPX6 916 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms