RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMG7-215ENST00000515829 LSP1P33241 339 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 ATP11AP98196 1134 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 ZNF713Q8N859 430 aaPredicted RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 NEK9Q8TD19 979 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 ELAC2Q9BQ52 826 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 C10orf76Q5T2E6 689 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 C6orf163Q5TEZ5 329 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 TAB3Q8N5C8 712 aaPredicted RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 MLXIPLQ9NP71 852 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 A0A087X0T9 212 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 A0A1W2PQJ5 194 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 ZBTB5O15062 677 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 FAM228BP0C875 321 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 DLATP10515 647 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 MDH1P40925 334 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 GRB10Q13322 594 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 APBB1IPQ7Z5R6 666 aaPredicted RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 ZNF473Q8WTR7 871 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 SLC4A9Q96Q91 983 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 FNBP1Q96RU3 617 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 TRIM7Q9C029 511 aa11.1□□□□□ -0.63
SMG7-215ENST00000515829 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
SMG7-215ENST00000515829 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 TTI1O43156 1089 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 THAP12O43422 761 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 TBC1D1Q86TI0 1168 aaPredicted RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.09□□□□□ -0.633e-6■■□□□ 11.9
SMG7-215ENST00000515829 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 LMTK3Q96Q04 1460 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 FANCGO15287 622 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 GLI1P08151 1106 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 MKRN4PQ13434 485 aaPredicted RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 ZNF746Q6NUN9 644 aaPredicted RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 MIER3Q7Z3K6 550 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 HOOK2Q96ED9 719 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 TRIM51Q9BSJ1 452 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 ODF2LQ9ULJ1 636 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 CCDC188H7C350 402 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 ACSL3O95573 720 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 SYF2O95926 243 aaKnown RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 SMTNP53814 917 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 PPP2R5EQ16537 467 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 KIAA0895Q8NCT3 520 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
SMG7-215ENST00000515829 EPN3Q9H201 632 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 SORBS3O60504 671 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 GAS8O95995 478 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 MMEP08473 750 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 PBX1P40424 430 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 NSMFQ6X4W1 530 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 GDAP1Q8TB36 358 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 PSMD1Q99460 953 aa11.09□□□□□ -0.63
SMG7-215ENST00000515829 GRID2IPA4D2P6 1211 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PTK2Q05397 1052 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 WDR44Q5JSH3 913 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 FAM102BQ5T8I3 360 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 CASKIN2Q8WXE0 1202 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 IQCGQ9H095 443 aaKnown RBP11.08□□□□□ -0.64
SMG7-215ENST00000515829 DBNDD1Q9H9R9 158 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 IFNB1P01574 187 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 NFIXQ14938 502 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 CROCCP2Q86T23 111 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 RGPD8O14715 1765 aaPredicted RBP11.08□□□□□ -0.64
SMG7-215ENST00000515829 COPB2P35606 906 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 ABCB5Q2M3G0 1257 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PACS2Q86VP3 889 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 CCDC13Q8IYE1 715 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 MTRQ99707 1265 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 VPS37BQ9H9H4 285 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PASKQ96RG2 1323 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PHF20L1A8MW92 1017 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 RASGRF2O14827 1237 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 PDIA5Q14554 519 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 QRICH1Q2TAL8 776 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 ZNF653Q96CK0 615 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 THOC1Q96FV9 657 aaKnown RBP11.08□□□□□ -0.64
SMG7-215ENST00000515829 PARVGQ9HBI0 331 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 TMOD4Q9NZQ9 345 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 LARSQ9P2J5 1176 aaKnown RBP11.08□□□□□ -0.64
SMG7-215ENST00000515829 NARFQ9UHQ1 456 aa11.08□□□□□ -0.64
SMG7-215ENST00000515829 GOLGA8IPA6NC78 632 aa11.07□□□□□ -0.64
SMG7-215ENST00000515829 GOLGA8JA6NMD2 632 aa11.07□□□□□ -0.64
SMG7-215ENST00000515829 SERPINB2P05120 415 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms