RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, human

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM3-222	ENST00000515609	COASY	Q13057	564 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	LAMC2	Q13753	1193 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	GRB14	Q14449	540 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	ECM1	Q16610	540 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	ZNF792	Q3KQV3	632 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	RINT1	Q6NUQ1	792 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	MAMDC4	Q6UXC1	1216 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	KCNK18	Q7Z418	384 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	DHX37	Q8IY37	1157 aa	Known RBP	10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	BANK1	Q8NDB2	785 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	SEPT1	Q8WYJ6	367 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	KIFAP3	Q92845	792 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	ABHD16B	Q9H3Z7	469 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	ZHX3	Q9H4I2	956 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	EFCC1	Q9HA90	598 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	FANCL	Q9NW38	375 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	CGN	Q9P2M7	1197 aa	Known RBP	10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	CTNND2	Q9UQB3	1225 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	PHLPP2	Q6ZVD8	1323 aa		10.51	□□□□□ -0.73
TPM3-222	ENST00000515609	KIF3C	O14782	793 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	CA12	O43570	354 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ATP9A	O75110	1047 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	DGAT1	O75907	488 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	RGS20	O76081	388 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ATG7	O95352	703 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PGK2	P07205	417 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	CASP1	P29466	404 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	SNRPF	P62306	86 aa	Known RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	FANCC	Q00597	558 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	FKBP3	Q00688	224 aa	Known RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	EHHADH	Q08426	723 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	GIT2	Q14161	759 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	KIF22	Q14807	665 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	NCAPH	Q15003	741 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ARHGEF6	Q15052	776 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	BRDT	Q58F21	947 aa	Predicted RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	XKR9	Q5GH70	373 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	CENPP	Q6IPU0	288 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PADI6	Q6TGC4	694 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ABHD15	Q6UXT9	468 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	C1orf186	Q6ZWK4	172 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ARMCX2	Q7L311	632 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	TRMT44	Q8IYL2	757 aa	Known RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	MYCT1	Q8N699	235 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	CSGALNACT2	Q8N6G5	542 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PIGO	Q8TEQ8	1089 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	IQCD	Q96DY2	449 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	UIMC1	Q96RL1	719 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PTPN18	Q99952	460 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	REEP2	Q9BRK0	252 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	PORCN	Q9H237	461 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	MRPL44	Q9H9J2	332 aa	Known RBP	10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	ZNF302	Q9NR11	478 aa		10.5	□□□□□ -0.73
TPM3-222	ENST00000515609	CALU	O43852	315 aa	Predicted RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	GGPS1	O95749	300 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	CCNE2	O96020	404 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	GH1	P01241	217 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	TXN	P10599	105 aa	Known RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	ZNF18	P17022	549 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	UBA1	P22314	1058 aa	Known RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	RFC5	P40937	340 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	RGS2	P41220	211 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	RARRES1	P49788	294 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	ZNF131	P52739	623 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	RTP1	P59025	263 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	PSMC6	P62333	389 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	PPP2R3A	Q06190	1150 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	STK4	Q13043	487 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	MAP2K5	Q13163	448 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	PPP2R5A	Q15172	486 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	EDRF1	Q3B7T1	1238 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	ARSH	Q5FYA8	562 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	ODR4	Q5SWX8	454 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	CELF3	Q5SZQ8	465 aa	Known RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	IQSEC1	Q6DN90	963 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	SWSAP1	Q6NVH7	229 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	CYFIP1	Q7L576	1253 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	HS2ST1	Q7LGA3	356 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	PLPPR4	Q7Z2D5	763 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	FAM178B	Q8IXR5	827 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	AFAP1L1	Q8TED9	768 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	SLC7A3	Q8WY07	619 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	HVCN1	Q96D96	273 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	ZFP91	Q96JP5	570 aa	Predicted RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	IFT74	Q96LB3	600 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	CEP63	Q96MT8	703 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	PURB	Q96QR8	312 aa	Known RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	SMARCAD1	Q9H4L7	1026 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	TMEM206	Q9H813	350 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	SLC39A2	Q9NP94	309 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	CREBZF	Q9NS37	354 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	GABBR1	Q9UBS5	961 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	NRBP1	Q9UHY1	535 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	DDX41	Q9UJV9	622 aa	Known RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	EXOC7	Q9UPT5	735 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	GDA	Q9Y2T3	454 aa		10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.49	□□□□□ -0.73
TPM3-222	ENST00000515609	LRRC10B	A6NIK2	292 aa		10.48	□□□□□ -0.73
TPM3-222	ENST00000515609	IGF2BP3	O00425	579 aa	Known RBP eCLIP	10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms