RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 UBE2SQ16763 222 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 TRIM67Q6ZTA4 783 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 RBM23Q86U06 439 aaKnown RBP18.04■□□□□ 0.48
LMNA-223ENST00000515459 CMTR1Q8N1G2 835 aaKnown RBP18.04■□□□□ 0.48
LMNA-223ENST00000515459 TMTC2Q8N394 836 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 MTA3Q9BTC8 594 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 CELF4Q9BZC1 486 aaKnown RBP18.04■□□□□ 0.48
LMNA-223ENST00000515459 SLC9A2Q9UBY0 812 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 LRFN2Q9ULH4 789 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 PCDHA6Q9UN73 950 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 PCDHA8Q9Y5H6 950 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 PCDHA2Q9Y5H9 948 aa18.04■□□□□ 0.48
LMNA-223ENST00000515459 WDFY4Q6ZS81 3184 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 TMEM221A6NGB7 291 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 CCDC69A6NI79 296 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 LOC730098B7Z3J9 87 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 M0R296 226 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 SGSM2O43147 1006 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 PDE4AP27815 886 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 PKN1Q16512 942 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 NME8Q8N427 588 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 MAP4K1Q92918 833 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 PBXIP1Q96AQ6 731 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 KCNH7Q9NS40 1196 aa18.03■□□□□ 0.48
LMNA-223ENST00000515459 BARX2Q9UMQ3 279 aaPredicted RBP18.03■□□□□ 0.48
LMNA-223ENST00000515459 KDM3AQ9Y4C1 1321 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 SMIM35A0A1B0GVV1 85 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 PRC1O43663 620 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 GLP2RO95838 553 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 GATMP50440 423 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 PLCB4Q15147 1175 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 FNDC1Q4ZHG4 1894 aaPredicted RBP18.02■□□□□ 0.48
LMNA-223ENST00000515459 PLPPR4Q7Z2D5 763 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 TRAPPC12Q8WVT3 735 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 TLE6Q9H808 572 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 USP15Q9Y4E8 981 aaPredicted RBP18.02■□□□□ 0.48
LMNA-223ENST00000515459 PCDHB7Q9Y5E2 793 aa18.02■□□□□ 0.48
LMNA-223ENST00000515459 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 CALM1P0DP23 149 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 CALM2P0DP24 149 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 CALM3P0DP25 149 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 RXRAP19793 462 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 MCM5P33992 734 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 STAT5BP51692 787 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 PTPN5P54829 565 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 ACTR2P61160 394 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 ZXDAP98168 799 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 KRT76Q01546 638 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 UBE3AQ05086 875 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 CBX2Q14781 532 aaPredicted RBP18.01■□□□□ 0.47
LMNA-223ENST00000515459 FAM43BQ6ZT52 329 aaPredicted RBP18.01■□□□□ 0.47
LMNA-223ENST00000515459 SUGP1Q8IWZ8 645 aaKnown RBP18.01■□□□□ 0.47
LMNA-223ENST00000515459 PRSS33Q8NF86 280 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 MICAL1Q8TDZ2 1067 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 TMEM87BQ96K49 555 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 PRRX2Q99811 253 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 MXRA8Q9BRK3 442 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 SDF4Q9BRK5 362 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 TMX1Q9H3N1 280 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 AAASQ9NRG9 546 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
LMNA-223ENST00000515459 RBM8AQ9Y5S9 174 aaKnown RBP18.01■□□□□ 0.47
LMNA-223ENST00000515459 NFASCO94856 1347 aa18■□□□□ 0.47
LMNA-223ENST00000515459 hCG_1642624A0A1W2PR95 340 aa18■□□□□ 0.47
LMNA-223ENST00000515459 FSD2A1L4K1 749 aa18■□□□□ 0.47
LMNA-223ENST00000515459 SH2B2O14492 632 aaPredicted RBP18■□□□□ 0.47
LMNA-223ENST00000515459 IBSPP21815 317 aaPredicted RBP18■□□□□ 0.47
LMNA-223ENST00000515459 SARSP49591 514 aaKnown RBP18■□□□□ 0.47
LMNA-223ENST00000515459 NFX1Q12986 1120 aaKnown RBP18■□□□□ 0.47
LMNA-223ENST00000515459 TMEM266Q2M3C6 531 aa18■□□□□ 0.47
LMNA-223ENST00000515459 SPOUT1Q5T280 376 aaKnown RBP18■□□□□ 0.47
LMNA-223ENST00000515459 MTHFD1LQ6UB35 978 aa18■□□□□ 0.47
LMNA-223ENST00000515459 PHF7Q9BWX1 381 aaPredicted RBP18■□□□□ 0.47
LMNA-223ENST00000515459 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
LMNA-223ENST00000515459 PCDHGC5Q9Y5F6 944 aa18■□□□□ 0.47
LMNA-223ENST00000515459 TRIOO75962 3097 aa18■□□□□ 0.47
LMNA-223ENST00000515459 KMT2EQ8IZD2 1858 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 LIFRP42702 1097 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 SLC26A2P50443 739 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 IER5LQ5T953 404 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 HEATR3Q7Z4Q2 680 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 CCDC82Q8N4S0 544 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 CYP2W1Q8TAV3 490 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 RPGRIP1Q96KN7 1286 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 TLR9Q9NR96 1032 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 GINS2Q9Y248 185 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
LMNA-223ENST00000515459 PER2O15055 1255 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 RPS6KA5O75582 802 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
LMNA-223ENST00000515459 ODR4Q5SWX8 454 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 FBXL6Q8N531 539 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 ATP8B4Q8TF62 1192 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 CDCA3Q99618 268 aaPredicted RBP17.98■□□□□ 0.47
LMNA-223ENST00000515459 C1orf112Q9NSG2 853 aa17.98■□□□□ 0.47
LMNA-223ENST00000515459 DENND3A2RUS2 1198 aa17.97■□□□□ 0.47
LMNA-223ENST00000515459 TBKBP1A7MCY6 615 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms