RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 RAB11FIP4Q86YS3 637 aa17.17■□□□□ 0.34
DDR1-278ENST00000515233 NPAS4Q8IUM7 802 aa17.17■□□□□ 0.34
DDR1-278ENST00000515233 SDF4Q9BRK5 362 aa17.17■□□□□ 0.34
DDR1-278ENST00000515233 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
DDR1-278ENST00000515233 FAM49AQ9H0Q0 323 aaPredicted RBP17.17■□□□□ 0.34
DDR1-278ENST00000515233 RBM28Q9NW13 759 aaKnown RBP17.17■□□□□ 0.34
DDR1-278ENST00000515233 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 IGKV6D-21A0A0A0MT36 114 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 MEIS1O00470 390 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 MBTPS2O43462 519 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 DLX2Q07687 328 aaPredicted RBP17.16■□□□□ 0.34
DDR1-278ENST00000515233 ADAM15Q13444 863 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 TYW1BQ6NUM6 668 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 PPP1R18Q6NYC8 613 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
DDR1-278ENST00000515233 SPPL3Q8TCT6 385 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 UPF3BQ9BZI7 483 aaKnown RBP17.16■□□□□ 0.34
DDR1-278ENST00000515233 ALG13Q9NP73 1137 aaKnown RBP17.16■□□□□ 0.34
DDR1-278ENST00000515233 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 MRPL42Q9Y6G3 142 aaKnown RBP17.16■□□□□ 0.34
DDR1-278ENST00000515233 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
DDR1-278ENST00000515233 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
DDR1-278ENST00000515233 NAPAP54920 295 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
DDR1-278ENST00000515233 FUT2Q10981 343 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 ITGB3BPQ13352 177 aaPredicted RBP17.15■□□□□ 0.34
DDR1-278ENST00000515233 MTHFD1LQ6UB35 978 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 GLT8D2Q9H1C3 349 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 AGO4Q9HCK5 861 aaKnown RBP17.15■□□□□ 0.34
DDR1-278ENST00000515233 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
DDR1-278ENST00000515233 ITGB1P05556 798 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 SCG2P13521 617 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 KLRC1P26715 233 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.338e-7■■■■□ 24.7
DDR1-278ENST00000515233 IRS1P35568 1242 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 SREBF1P36956 1147 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 KRT76Q01546 638 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 TMEM62Q0P6H9 643 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 PAK2Q13177 524 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 RNF20Q5VTR2 975 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 NIPA1Q7RTP0 329 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 POP1Q99575 1024 aaKnown RBP17.14■□□□□ 0.33
DDR1-278ENST00000515233 ANO3Q9BYT9 981 aa17.14■□□□□ 0.33
DDR1-278ENST00000515233 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
DDR1-278ENST00000515233 KIAA1671Q9BY89 1806 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 STXBP3O00186 592 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 HBP1O60381 514 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 TBX10O75333 385 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 DNAJB1P25685 340 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 ADCY7P51828 1080 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
DDR1-278ENST00000515233 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
DDR1-278ENST00000515233 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
DDR1-278ENST00000515233 KLHL23Q8NBE8 558 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 PGBD1Q96JS3 809 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 MSLNLQ96KJ4 702 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 TMX1Q9H3N1 280 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 IGFLR1Q9H665 355 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 BARHL2Q9NY43 387 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
DDR1-278ENST00000515233 C5orf42Q9H799 3197 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 LINC01565O15544 149 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 ZBTB43O43298 467 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 EYA4O95677 639 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 SARSP49591 514 aaKnown RBP17.12■□□□□ 0.33
DDR1-278ENST00000515233 CLUL1Q15846 466 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 RTN1Q16799 776 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 ATP8B4Q8TF62 1192 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 KCNH6Q9H252 994 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
DDR1-278ENST00000515233 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 COL1A2P08123 1366 aa17.12■□□□□ 0.33
DDR1-278ENST00000515233 DHX15O43143 795 aaKnown RBP17.11■□□□□ 0.33
DDR1-278ENST00000515233 CCNE2O96020 404 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 ZNF76P36508 570 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 RCAN1P53805 252 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 NFX1Q12986 1120 aaKnown RBP17.11■□□□□ 0.33
DDR1-278ENST00000515233 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
DDR1-278ENST00000515233 HERC4Q5GLZ8 1057 aaPredicted RBP17.11■□□□□ 0.33
DDR1-278ENST00000515233 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 FAM160B1Q5W0V3 765 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 EFHBQ8N7U6 833 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 CRYGNQ8WXF5 182 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 UIMC1Q96RL1 719 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 CDHR5Q9HBB8 845 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
DDR1-278ENST00000515233 RGS18Q9NS28 235 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms