RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NSMCE1Q8WV22 266 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 GSDMAQ96QA5 445 aa8.15□□□□□ -1.1
PDLIM5-219ENST00000514743 GOLGB1Q14789 3259 aaKnown RBP8.15□□□□□ -1.11
PDLIM5-219ENST00000514743 ARFGEF1Q9Y6D6 1849 aa8.15□□□□□ -1.11
PDLIM5-219ENST00000514743 UBAP1LF5GYI3 381 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 BUB1BO60566 1050 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 N4BP1O75113 896 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TMCC1O94876 653 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 CYP1A2P05177 515 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 GYS1P13807 737 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 IL1R1P14778 569 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 RASA1P20936 1047 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ARHGAP25P42331 645 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 AFMP43652 599 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 NR1I3Q14994 352 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 CDKAL1Q5VV42 579 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TMEM53Q6P2H8 277 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 LRRC49Q8IUZ0 686 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TC2NQ8N9U0 490 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 FAM71BQ8TC56 605 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TGFBRAP1Q8WUH2 860 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 MAIP1Q8WWC4 291 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 GJD4Q96KN9 370 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 A0A1B0GTH6 734 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 MTA2O94776 668 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TCF7P36402 384 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 USP5P45974 858 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 NT5C2P49902 561 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF131P52739 623 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 NLRP5P59047 1200 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TRIM65Q6PJ69 517 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 SMYD4Q8IYR2 804 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF280CQ8ND82 737 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 MAGEC3Q8TD91 643 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 KAT14Q9H8E8 782 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 CD209Q9NNX6 404 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 SH3GLB2Q9NR46 395 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 DKK3Q9UBP4 350 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 DACH1Q9UI36 760 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TRIM43BA6NCK2 446 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 PALM3A6NDB9 673 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TADA3O75528 432 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TOP1P11387 765 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ATP4AP20648 1035 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 NFKBIAP25963 317 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 PBX1P40424 430 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 GNAQP50148 359 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 MYO1EQ12965 1108 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ITGA7Q13683 1181 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 CCDC93Q567U6 631 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 NUGGCQ68CJ6 796 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ZNF804AQ7Z570 1209 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 PALB2Q86YC2 1186 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 BLIDQ8IZY5 108 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 RASGRP4Q8TDF6 673 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TEKT4Q8WW24 435 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 ATP6V0A1Q93050 837 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 TBC1D31Q96DN5 1066 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 MUC3BQ9H195 1237 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 EPC1Q9H2F5 836 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 AS3MTQ9HBK9 375 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 SLC40A1Q9NP59 571 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 PCDHA4Q9UN74 947 aa8.14□□□□□ -1.11
PDLIM5-219ENST00000514743 GPR75-ASB3A0A0A6YYF3 556 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 TBKBP1A7MCY6 615 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 HIP1RO75146 1068 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 LGR5O75473 907 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PDGFRBP09619 1106 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 KIF5BP33176 963 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 MCM7P33993 719 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 POLR2FP61218 127 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 SLMAPQ14BN4 828 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 ACCSLQ4AC99 568 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 BPHLQ86WA6 291 aaPredicted RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 MAPKAPK5Q8IW41 473 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 ARHGAP18Q8N392 663 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 STAMQ92783 540 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 IWS1Q96ST2 819 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 TMEM47Q9BQJ4 181 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PCMTD2Q9NV79 361 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 ATXN10Q9UBB4 475 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PCDHA6Q9UN73 950 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PCDHA8Q9Y5H6 950 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 PABPN1LA6NDY0 278 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 EFCAB8A8MWE9 144 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 STXBP3O00186 592 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 TEX33O43247 280 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 CLTAP09496 248 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 BTDP43251 543 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 NOVP48745 357 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 GSTO1P78417 241 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 MXRA7P84157 204 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 SPECC1LQ69YQ0 1117 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 CAPN12Q6ZSI9 719 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 LRRC15Q8TF66 581 aa8.13□□□□□ -1.11
PDLIM5-219ENST00000514743 OPTNQ96CV9 577 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms