RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	NDOR1	Q9UHB4	597 aa		4.64	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	FBXO10	Q9UK96	956 aa		4.64	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ARVCF	O00192	962 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	DDX3X	O00571	662 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SLC27A2	O14975	620 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	LAMTOR5	O43504	91 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	BRINP1	O60477	761 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	EYA4	O95677	639 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	IGFALS	P35858	605 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	BUD31	P41223	144 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	EPHB1	P54762	984 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CNNM4	Q6P4Q7	775 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TRMT10B	Q6PF06	316 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KCNT2	Q6UVM3	1135 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GLB1L	Q6UWU2	654 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	C16orf59	Q7L2K0	433 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KIF18B	Q86Y91	864 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	IGDCC4	Q8TDY8	1250 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ORAI3	Q9BRQ5	295 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SLC52A2	Q9HAB3	445 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ARHGAP20	Q9P2F6	1191 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TCEAL9	Q9UHQ7	104 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	G3BP2	Q9UN86	482 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ATP23	Q9Y6H3	246 aa		4.63	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	FAM83G	A6ND36	823 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	HERVK_113	P62684	666 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GUCY1A3	Q02108	690 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	RNF219	Q5W0B1	726 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	MCTP2	Q6DN12	878 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ARHGEF18	Q6ZSZ5	1173 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	UBE2R2	Q712K3	238 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CXXC5	Q7LFL8	322 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	UBR7	Q8N806	425 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	WDR48	Q8TAF3	677 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	LEO1	Q8WVC0	666 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CCDC136	Q96JN2	1154 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CDK5RAP1	Q96SZ6	601 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KCNJ15	Q99712	375 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	IPPK	Q9H8X2	491 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CATSPERZ	Q9NTU4	200 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CROT	Q9UKG9	612 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SRPK3	Q9UPE1	567 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	THRAP3	Q9Y2W1	955 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TNPO3	Q9Y5L0	923 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	EID1	Q9Y6B2	187 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZNF536	O15090	1300 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	WASHC2C	Q9Y4E1	1318 aa		4.62	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TCRBV16S1A1N1	A0A5B0	115 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZNF839	A8K0R7	811 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267		H0Y858	1186 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PRICKLE3	O43900	615 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	OPA1	O60313	960 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZEB2	O60315	1214 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ALDH1L1	O75891	902 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	MAGEA10	P43363	369 aa	Predicted RBP	4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GUCY2F	P51841	1108 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	NEK4	P51957	841 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	EPHB4	P54760	987 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	EVA1C	P58658	441 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SKIDA1	Q1XH10	827 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CD276	Q5ZPR3	534 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SLFN13	Q68D06	897 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	TMC5	Q6UXY8	1006 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	RALYL	Q86SE5	291 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	FMNL3	Q8IVF7	1028 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SCLY	Q96I15	445 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SEMA4A	Q9H3S1	761 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SMPD4	Q9NXE4	827 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ARHGAP28	Q9P2N2	729 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ADAM29	Q9UKF5	820 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	INVS	Q9Y283	1065 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PHLDB1	Q86UU1	1377 aa		4.61	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GPR39	O43194	453 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CLASP2	O75122	1294 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PTPN1	P18031	435 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	NFATC3	Q12968	1075 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CFAP100	Q494V2	611 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	BTBD8	Q5XKL5	378 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	FGD2	Q7Z6J4	655 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CIR1	Q86X95	450 aa	Predicted RBP	4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	KBTBD2	Q8IY47	623 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CHST13	Q8NET6	341 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PCDH19	Q8TAB3	1148 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	WDR66	Q8TBY9	1149 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CLEC4D	Q8WXI8	215 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	AJUBA	Q96IF1	538 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SCYL1	Q96KG9	808 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	C8orf48	Q96LL4	319 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZSWIM3	Q96MP5	696 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	GPR20	Q99678	358 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	CHMP4A	Q9BY43	222 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	MTFR1L	Q9H019	292 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PUS7L	Q9H0K6	701 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	SEC61A2	Q9H9S3	476 aa		4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.6	□□□□□ -1.67
CALCOCO2-223	ENST00000514267	ZFP69B	Q9UJL9	534 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms