RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 LMAN2LQ9H0V9 348 aa9.97□□□□□ -0.81
CAST-240ENST00000514055 IRF2BPLQ9H1B7 796 aa9.97□□□□□ -0.81
CAST-240ENST00000514055 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
CAST-240ENST00000514055 EMSYQ7Z589 1322 aa9.97□□□□□ -0.81
CAST-240ENST00000514055 KMT2BQ9UMN6 2715 aaPredicted RBP9.97□□□□□ -0.81
CAST-240ENST00000514055 OPLAHO14841 1288 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 PRPF3O43395 683 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 LARGE1O95461 756 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 F2P00734 622 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 CFBP00751 764 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 RB1P06400 928 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 IFNAR1P17181 557 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 SCRN1Q12765 414 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 COASYQ13057 564 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 NTRK3Q16288 839 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 ME3Q16798 604 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 RBM23Q86U06 439 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 SERINC5Q86VE9 423 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 DHX37Q8IY37 1157 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 SEPT8Q92599 483 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 PHKBQ93100 1093 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 TAAR1Q96RJ0 339 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 C11orf84Q9BUA3 381 aaPredicted RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 MAF1Q9H063 256 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 RC3H2Q9HBD1 1191 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 COL20A1Q9P218 1284 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 DDX41Q9UJV9 622 aaKnown RBP9.96□□□□□ -0.82
CAST-240ENST00000514055 LIMCH1Q9UPQ0 1083 aa9.96□□□□□ -0.82
CAST-240ENST00000514055 KIAA1217Q5T5P2 1943 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 GCOM1H8Y6P7 765 aaPredicted RBP9.95□□□□□ -0.82
CAST-240ENST00000514055 hCG_1984214I3L0E3 225 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 PPFIA3O75145 1194 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 CDKL5O76039 1030 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 MMP1P03956 469 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 SCG2P13521 617 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 ICAM3P32942 547 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 NRIP1P48552 1158 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 HSD17B4P51659 736 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 GHRHRQ02643 423 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 PTPN21Q16825 1174 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 PFKFB3Q16875 520 aaPredicted RBP9.95□□□□□ -0.82
CAST-240ENST00000514055 PPP1R18Q6NYC8 613 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 ZNF713Q8N859 430 aaPredicted RBP9.95□□□□□ -0.82
CAST-240ENST00000514055 NECAB1Q8N987 351 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 DNERQ8NFT8 737 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 SYTL5Q8TDW5 730 aaPredicted RBP9.95□□□□□ -0.82
CAST-240ENST00000514055 CUL5Q93034 780 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 RMDN1Q96DB5 314 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 RIPOR3Q96MK2 946 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 PHF7Q9BWX1 381 aaPredicted RBP9.95□□□□□ -0.82
CAST-240ENST00000514055 SMOC2Q9H3U7 446 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 PLAGL2Q9UPG8 496 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 RALGAPA2Q2PPJ7 1873 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 DMXL1Q9Y485 3027 aa9.95□□□□□ -0.82
CAST-240ENST00000514055 ADGRA3Q8IWK6 1321 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 TREHO43280 583 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 ITGB1P05556 798 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 HOXA13P31271 388 aaPredicted RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 NAPAP54920 295 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 SSRP1Q08945 709 aaKnown RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 SAMD3Q8N6K7 520 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 EFHBQ8N7U6 833 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 VN1R2Q8NFZ6 395 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 CLP1Q92989 425 aaKnown RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 NKD2Q969F2 451 aaPredicted RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 CNTNAP3BQ96NU0 1288 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 MPHOSPH6Q99547 160 aaKnown RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 KATNAL1Q9BW62 490 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 CNTNAP3Q9BZ76 1288 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 PSTPIP2Q9H939 334 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 BARHL2Q9NY43 387 aa9.94□□□□□ -0.82
CAST-240ENST00000514055 MAP3K20Q9NYL2 800 aaKnown RBP9.94□□□□□ -0.82
CAST-240ENST00000514055 STK36Q9NRP7 1315 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 B4DLN1 442 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 PER2O15055 1255 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 DEXIO95424 95 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 ADCY7P51828 1080 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
CAST-240ENST00000514055 TYW1BQ6NUM6 668 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 PPTC7Q8NI37 304 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 SMARCC2Q8TAQ2 1214 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 SPPL3Q8TCT6 385 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 NSUN6Q8TEA1 469 aaKnown RBP9.93□□□□□ -0.82
CAST-240ENST00000514055 CCDC12Q8WUD4 166 aaPredicted RBP9.93□□□□□ -0.82
CAST-240ENST00000514055 SUSD6Q92537 303 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 ATP6V0A1Q93050 837 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
CAST-240ENST00000514055 RMDN3Q96TC7 470 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 APOL5Q9BWW9 433 aa9.93□□□□□ -0.82
CAST-240ENST00000514055 SH2B1Q9NRF2 756 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms