RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 CFAP46Q8IYW2 2715 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 PTPDC1A2A3K4 754 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 HRO43593 1189 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 TOP3BO95985 862 aaKnown RBP9.05□□□□□ -0.96
CLDND1-229ENST00000513988 STAG3L1P0CL83 205 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 MAGEA9P43362 315 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 FOSBP53539 338 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 PTPN14Q15678 1187 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 LY6KQ17RY6 165 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 STPG1Q5TH74 334 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 CCDC62Q6P9F0 684 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 RPAP2Q8IXW5 612 aaPredicted RBP9.05□□□□□ -0.96
CLDND1-229ENST00000513988 TMEFF1Q8IYR6 380 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 SLC44A3Q8N4M1 653 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 SDR42E1Q8WUS8 393 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 NYAP2Q9P242 653 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 ASXL3Q9C0F0 2248 aa9.05□□□□□ -0.96
CLDND1-229ENST00000513988 B4DLN1 442 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 TMEM232C9JQI7 657 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 TREHO43280 583 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 PRB1P04280 392 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 BMP3P12645 472 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 CALML3P27482 149 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 GATMP50440 423 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 STAT2P52630 851 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 MRPL12P52815 198 aaKnown RBP9.04□□□□□ -0.96
CLDND1-229ENST00000513988 NRLP54845 237 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 STARD6P59095 220 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 UBXN2BQ14CS0 331 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 TMED8Q6PL24 325 aaPredicted RBP9.04□□□□□ -0.96
CLDND1-229ENST00000513988 TMC5Q6UXY8 1006 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 C16orf86Q6ZW13 317 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 AMOTL1Q8IY63 956 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 CHURC1Q8WUH1 139 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 MRPS27Q92552 414 aaKnown RBP9.04□□□□□ -0.96
CLDND1-229ENST00000513988 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLDND1-229ENST00000513988 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 CLIP2Q9UDT6 1046 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
CLDND1-229ENST00000513988 KANSL1LA0AUZ9 987 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 EDNRBP24530 442 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 SNAP25P60880 206 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 SF3A2Q15428 464 aaKnown RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 ZNF605Q86T29 641 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 FAM160B2Q86V87 743 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 PROSER1Q86XN7 944 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 COLGALT1Q8NBJ5 622 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 NXPE3Q969Y0 559 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 PRMT8Q9NR22 394 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 LRFN2Q9ULH4 789 aa9.03□□□□□ -0.96
CLDND1-229ENST00000513988 FRMPD2Q68DX3 1309 aaPredicted RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 SPTAN1Q13813 2472 aaKnown RBP9.03□□□□□ -0.96
CLDND1-229ENST00000513988 MYH4Q9Y623 1939 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 CYP2D7A0A087X1C5 515 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 FAM170BA6NMN3 283 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 TK2O00142 265 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 GIPC1O14908 333 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
CLDND1-229ENST00000513988 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
CLDND1-229ENST00000513988 CA8P35219 290 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 SMC1AQ14683 1233 aaKnown RBP9.02□□□□□ -0.97
CLDND1-229ENST00000513988 LPIN1Q14693 890 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 C12orf60Q5U649 245 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 SLC30A10Q6XR72 485 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 SEPT14Q6ZU15 432 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 PPTC7Q8NI37 304 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 DBNDD2Q9BQY9 259 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 OSBPL6Q9BZF3 934 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 SLC2A4RGQ9NR83 387 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 HDAC5Q9UQL6 1122 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 NEUROG3Q9Y4Z2 214 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 DOPEY1Q5JWR5 2465 aa9.02□□□□□ -0.97
CLDND1-229ENST00000513988 ABCA12Q86UK0 2595 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 J3QKU1 62 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 NFIBO00712 420 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 KRT38O76015 456 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 CHRNA1P02708 482 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 SMIM10L2AP0DMW4 78 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 SMIM10L2BP0DMW5 78 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 SCG2P13521 617 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 IBSPP21815 317 aaPredicted RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 PLCB3Q01970 1234 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 TROAPQ12815 778 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 LAMC2Q13753 1193 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 LETM2Q2VYF4 491 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 SLFN13Q68D06 897 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 GPR149Q86SP6 731 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 CABP7Q86V35 215 aa9.01□□□□□ -0.97
CLDND1-229ENST00000513988 MRPL43Q8N983 215 aaKnown RBP9.01□□□□□ -0.97
CLDND1-229ENST00000513988 TMEM87AQ8NBN3 555 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms