RNA–Protein interactions for RNA: ENST00000513841.1

ARHGEF28-213, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 3

Gene ARHGEF28, Length 710 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-213ENST00000513841 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 NME8Q8N427 588 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 KAT6AQ92794 2004 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 SLC5A5Q92911 643 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 GTF3C6Q969F1 213 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 LENG9Q96B70 501 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 ZBTB10Q96DT7 871 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 DISC1Q9NRI5 854 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 NRBP2Q9NSY0 501 aa13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 MAFBQ9Y5Q3 323 aaPredicted RBP13.09□□□□□ -0.31
ARHGEF28-213ENST00000513841 WDR64B1ANS9 1081 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 MARCH6O60337 910 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 TDP2O95551 362 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 AMHP03971 560 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 CA3P07451 260 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 IGFBP4P22692 258 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 DEFB103AP81534 67 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 LRCH2Q5VUJ6 765 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 PIK3AP1Q6ZUJ8 805 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 GJA10Q969M2 543 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 RAD9AQ99638 391 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 DDX25Q9UHL0 483 aaKnown RBP13.08□□□□□ -0.32
ARHGEF28-213ENST00000513841 SMIM35A0A1B0GVV1 85 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 M0QZ92 97 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 CHMP2AO43633 222 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 PSMD10O75832 226 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 GJB5O95377 273 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 SFNP31947 248 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 MRPS6P82932 125 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 TRIM29Q14134 588 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 MAFAQ8NHW3 353 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 APBB2Q92870 758 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 NAP1L4Q99733 375 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 IFIH1Q9BYX4 1025 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 CERS4Q9HA82 394 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 CDY2AQ9Y6F7 541 aa13.07□□□□□ -0.32
ARHGEF28-213ENST00000513841 ENPP3O14638 875 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 JAK2O60674 1132 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 UPP2O95045 317 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 GHRP10912 638 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 KRT2P35908 639 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 JAK3P52333 1124 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 TAP1Q03518 808 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 MGAT3Q09327 533 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 LPIN1Q14693 890 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 PPP4R3AQ6IN85 833 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 TOP1MTQ969P6 601 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 KIF2CQ99661 725 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 UNC45AQ9H3U1 944 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 CEP131Q9UPN4 1083 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 COL1A2P08123 1366 aa13.06□□□□□ -0.32
ARHGEF28-213ENST00000513841 BTBD18B2RXH4 712 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 RFXAPO00287 272 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 MAGEB2O15479 319 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 GCFC2P16383 781 aaKnown RBP13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 KRT40Q6A162 431 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 CCDC83Q8IWF9 413 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 METTL13Q8N6R0 699 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 ETNPPLQ8TBG4 499 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 PPM1EQ8WY54 764 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 ARNTL2Q8WYA1 636 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 FAM167AQ96KS9 214 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 UPF2Q9HAU5 1272 aaKnown RBP13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 GINS2Q9Y248 185 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 TRPV2Q9Y5S1 764 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 SQORQ9Y6N5 450 aa13.05□□□□□ -0.32
ARHGEF28-213ENST00000513841 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 LCHNA4D1U4 455 aa13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 ZBTB42B2RXF5 422 aa13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 ZNF862O60290 1169 aa13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 MMP1P03956 469 aa13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
ARHGEF28-213ENST00000513841 FOSBP53539 338 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms