RNA–Protein interactions for RNA: ENST00000513654.5

EXOSC9-212, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 3,882 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-212ENST00000513654 RIC8AQ9NPQ8 531 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 BMP2KQ9NSY1 1161 aaPredicted RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 MCM9Q9NXL9 1143 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 SLC12A4Q9UP95 1085 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 LRP6O75581 1613 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 AKAP11Q9UKA4 1901 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 FLOT1O75955 427 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 H2AFZP0C0S5 128 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 MYBL1P10243 752 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 CACNB1Q02641 598 aaPredicted RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 KRT79Q5XKE5 535 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 SAMD1Q6SPF0 538 aaPredicted RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 H2AFVQ71UI9 128 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 KRT25Q7Z3Z0 450 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 TBCKQ8TEA7 893 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 GLG1Q92896 1179 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 CENPTQ96BT3 561 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 TLCD1Q96CP7 247 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 CRNKL1Q9BZJ0 848 aaKnown RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 MTFR1LQ9H019 292 aa7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 SEPT11Q9NVA2 429 aaKnown RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 DBR1Q9UK59 544 aaKnown RBP7.17□□□□□ -1.26
EXOSC9-212ENST00000513654 POTEMA6NI47 508 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SUN1O94901 812 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 KRT18P05783 430 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ATP2A2P16615 1042 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 PCK1P35558 622 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 PDE6CP51160 858 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 DR1Q01658 176 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 CHRNDQ07001 517 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ZNF268Q14587 947 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 CALCRLQ16602 461 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 NUGGCQ68CJ6 796 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 MIS18BP1Q6P0N0 1132 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 OTUD6AQ7L8S5 288 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ZNF571Q7Z3V5 609 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SPOCK2Q92563 424 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 MMTAG2Q9BU76 263 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 C6orf50Q9HD87 102 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 THRAP3Q9Y2W1 955 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 DDX60Q8IY21 1712 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 HIP1RO75146 1068 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SMIM24O75264 130 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ABCB4P21439 1286 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 NCALDP61601 193 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 GRB10Q13322 594 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ADAM9Q13443 819 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 FAM26FQ5R3K3 315 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 PIGWQ7Z7B1 504 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 L3MBTL3Q96JM7 780 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 OSBPL1AQ9BXW6 950 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 BLOC1S4Q9NUP1 217 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 FGFR1OP2Q9NVK5 253 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 USP15Q9Y4E8 981 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ABCB11O95342 1321 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 TNS3Q68CZ2 1445 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 TCP11X1B4DZS4 312 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 KRT16P08779 473 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 PCP11498 1178 aaKnown RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SLC9A1P19634 815 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 MSH2P43246 934 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 KCNH2Q12809 1159 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 CAVIN4Q5BKX8 364 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 HERC4Q5GLZ8 1057 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ANKRD20A2Q5SQ80 823 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 C6orf118Q5T5N4 469 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ANKRD20A1Q5TYW2 823 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 ANKRD20A3Q5VUR7 823 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SYCE1Q8N0S2 351 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 RAB34Q9BZG1 259 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 BARHL2Q9NY43 387 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 NAGPAQ9UK23 515 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 TRIM33Q9UPN9 1127 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 JAG2Q9Y219 1238 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 NR2E1Q9Y466 385 aa7.16□□□□□ -1.26
EXOSC9-212ENST00000513654 SCN11AQ9UI33 1791 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 USP17L3A6NCW0 530 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 USP17L4A6NCW7 530 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 STXBP3O00186 592 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 CES2O00748 559 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 RASGRF2O14827 1237 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 SMNDC1O75940 238 aaKnown RBP eCLIP7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 PDHA1P08559 390 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 TSPY3P0CV98 308 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 TSPY8P0CW00 308 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 RARAP10276 462 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 GNA11P29992 359 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 MMP13P45452 471 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 COPS2P61201 443 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 NKX1-1Q15270 411 aaPredicted RBP7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 C10orf76Q5T2E6 689 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 SPTY2D1Q68D10 685 aaPredicted RBP7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 GALNT17Q6IS24 598 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 TAOK1Q7L7X3 1001 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 USP17L1Q7RTZ2 530 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 GDAP1Q8TB36 358 aa7.15□□□□□ -1.26
EXOSC9-212ENST00000513654 FBXO25Q8TCJ0 367 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms