RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 TLR6Q9Y2C9 796 aa5.9□□□□□ -1.46
HTT-211ENST00000513326 IL16Q14005 1332 aa5.9□□□□□ -1.47
HTT-211ENST00000513326 UMODL1Q5DID0 1318 aa5.9□□□□□ -1.47
HTT-211ENST00000513326 C19orf81C9J6K1 198 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 PIK3R2O00459 728 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 ADCY6O43306 1168 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 ADAMTS4O75173 837 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 TIMP1P01033 207 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 PF4P02776 101 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 ASNSP08243 561 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 TFE3P19532 575 aaPredicted RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 PTGS1P23219 599 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 TIMM10P62072 90 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 SETDB1Q15047 1291 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 HGSNATQ68CP4 663 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 DIEXFQ68CQ4 756 aaKnown RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 LLGL2Q6P1M3 1020 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 CATSPERGQ6ZRH7 1159 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 TRIM42Q8IWZ5 723 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 SLC44A5Q8NCS7 719 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 SPATA32Q96LK8 384 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 C12orf42Q96LP6 360 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 RPAP3Q9H6T3 665 aaPredicted RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 PRKRIP1Q9H875 184 aaPredicted RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 CERS4Q9HA82 394 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 XPNPEP3Q9NQH7 507 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 GNL3LQ9NVN8 582 aaKnown RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 AATFQ9NY61 560 aaKnown RBP eCLIP5.89□□□□□ -1.47
HTT-211ENST00000513326 HMG20BQ9P0W2 317 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 HERC5Q9UII4 1024 aaKnown RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 SUPT16HQ9Y5B9 1047 aaKnown RBP5.89□□□□□ -1.47
HTT-211ENST00000513326 FLT1P17948 1338 aa5.89□□□□□ -1.47
HTT-211ENST00000513326 FOCADQ5VW36 1801 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 ERC2O15083 957 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 WIPF1O43516 503 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 PGK2P07205 417 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 GSTP1P09211 210 aaKnown RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 CYP2C18P33260 490 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 GUCY1A2P33402 732 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 CCNA1P78396 465 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 NHLH1Q02575 133 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 ZNF252P-AS1Q0IIN9 211 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 PAK2Q13177 524 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 SUZ12Q15022 739 aaKnown RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 SF3A1Q15459 793 aaKnown RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 SNAP47Q5SQN1 464 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 MFSD5Q6N075 450 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 FBXL19Q6PCT2 694 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 LBX2Q6XYB7 198 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 ANKRD33Q7Z3H0 272 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 DPP9Q86TI2 863 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 PDZD3Q86UT5 571 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 CLEC10AQ8IUN9 316 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 GOLM1Q8NBJ4 401 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 STK35Q8TDR2 534 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 TGFBRAP1Q8WUH2 860 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 SREK1Q8WXA9 508 aaKnown RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 GPRASP2Q96D09 838 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 KLHDC7BQ96G42 594 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 MAML3Q96JK9 1138 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 FEZ1Q99689 392 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 CORO1BQ9BR76 489 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 MIR1-1HGQ9H1L0 117 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 CBX8Q9HC52 389 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 PI4KBQ9UBF8 816 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 MTCH2Q9Y6C9 303 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 SYNRGQ9UMZ2 1314 aa5.88□□□□□ -1.47
HTT-211ENST00000513326 COL4A4P53420 1690 aaPredicted RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 MYO5AQ9Y4I1 1855 aaKnown RBP5.88□□□□□ -1.47
HTT-211ENST00000513326 ZNF318Q5VUA4 2279 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 WDFY4Q6ZS81 3184 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 A0A1B0GUL7 405 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 A0A1W2PRG0 241 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 SPDYE3A6NKU9 549 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 PI4K2BG5E9Z4 385 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 SMIM22K7EJ46 135 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 GNB5O14775 395 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 TM4SF5O14894 197 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 GREM1O60565 184 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 GLRX3O76003 335 aaKnown RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 CIAO1O76071 339 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 RARBP10826 455 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 GARTP22102 1010 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 MCAMP43121 646 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 ACLYP53396 1101 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 DYNLL1P63167 89 aaKnown RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 FAM160A1Q05DH4 1040 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 TFCP2Q12800 502 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 PPIGQ13427 754 aaKnown RBP eCLIP5.87□□□□□ -1.47
HTT-211ENST00000513326 RAB3GAP1Q15042 981 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 POU4F3Q15319 338 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 LINC00114Q6XXX2 140 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 OTOP2Q7RTS6 562 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 CRACR2BQ8N4Y2 399 aaPredicted RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 ZGPATQ8N5A5 531 aaKnown RBP5.87□□□□□ -1.47
HTT-211ENST00000513326 GALNT11Q8NCW6 608 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 HERVK_113Q902F9 699 aa5.87□□□□□ -1.47
HTT-211ENST00000513326 FBXL18Q96ME1 805 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms