RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
CHD1-210ENST00000513064 XYLT2Q9H1B5 865 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 ZCCHC4Q9H5U6 513 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 L2HGDHQ9H9P8 463 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 MAPRE3Q9UPY8 281 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 ZKSCAN5Q9Y2L8 839 aa6.54□□□□□ -1.36
CHD1-210ENST00000513064 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 GOLGA6L22H0YM25 854 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 H7C1D1 291 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 PDE8AO60658 829 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 KLHL18O94889 574 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 CLSTN1O94985 981 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 CYP17A1P05093 508 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 ATP2A2P16615 1042 aaKnown RBP6.53□□□□□ -1.36
CHD1-210ENST00000513064 MC4RP32245 332 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 FNTBP49356 437 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 KIF11P52732 1056 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
CHD1-210ENST00000513064 RGL3Q3MIN7 710 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 TRMT10BQ6PF06 316 aaKnown RBP6.53□□□□□ -1.36
CHD1-210ENST00000513064 TTLL10Q6ZVT0 673 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 FEZF2Q8TBJ5 459 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
CHD1-210ENST00000513064 TACO1Q9BSH4 297 aaKnown RBP6.53□□□□□ -1.36
CHD1-210ENST00000513064 AMNQ9BXJ7 453 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 IFT57Q9NWB7 429 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 UCKL1Q9NWZ5 548 aa6.53□□□□□ -1.36
CHD1-210ENST00000513064 INHBBP09529 407 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 GJA9P57773 515 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 STILQ15468 1287 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 ZNF174Q15697 407 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 SKOR2Q2VWA4 1001 aaPredicted RBP6.52□□□□□ -1.37
CHD1-210ENST00000513064 NT5DC1Q5TFE4 455 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
CHD1-210ENST00000513064 CXXC5Q7LFL8 322 aaKnown RBP6.52□□□□□ -1.37
CHD1-210ENST00000513064 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 NXPE1Q8N323 547 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 KIAA1958Q8N8K9 716 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 BTBD2Q9BX70 525 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 PCIF1Q9H4Z3 704 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 OXSMQ9NWU1 459 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 FTSJ1Q9UET6 329 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 RAPGEFL1Q9UHV5 662 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 SPO11Q9Y5K1 396 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 CADPSQ9ULU8 1353 aa6.52□□□□□ -1.37
CHD1-210ENST00000513064 PRAMEF22A3QJZ6 481 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
CHD1-210ENST00000513064 ZNF891A8MT65 544 aaPredicted RBP6.51□□□□□ -1.37
CHD1-210ENST00000513064 GAS7O60861 476 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 CYP1A1P04798 512 aaPredicted RBP6.51□□□□□ -1.37
CHD1-210ENST00000513064 ECE1P42892 770 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 MASP1P48740 699 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 SCNN1BP51168 640 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 KIAA2012Q0VF49 1180 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 FRMD5Q7Z6J6 570 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 RNF180Q86T96 592 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 RTN4RL1Q86UN2 441 aaPredicted RBP6.51□□□□□ -1.37
CHD1-210ENST00000513064 SMC1BQ8NDV3 1235 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 HIPK4Q8NE63 616 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 MBD6Q96DN6 1003 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 LCORQ96JN0 433 aaPredicted RBP6.51□□□□□ -1.37
CHD1-210ENST00000513064 C16orf92Q96LL3 132 aa6.51□□□□□ -1.37
CHD1-210ENST00000513064 MROH6A6NGR9 719 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 H0Y858 1186 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 SLC9A1P19634 815 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 HOXA5P20719 270 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 IL13RA1P78552 427 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 EFHBQ8N7U6 833 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 OR2W6PQ8NHA6 318 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 LEO1Q8WVC0 666 aaPredicted RBP6.5□□□□□ -1.37
CHD1-210ENST00000513064 ELF4Q99607 663 aaPredicted RBP6.5□□□□□ -1.37
CHD1-210ENST00000513064 OR10A5Q9H207 317 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 TMX1Q9H3N1 280 aa6.5□□□□□ -1.37
CHD1-210ENST00000513064 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD1-210ENST00000513064 H2AFY2Q9P0M6 372 aaPredicted RBP6.5□□□□□ -1.37
CHD1-210ENST00000513064 PTX3P26022 381 aaPredicted RBP6.49□□□□□ -1.37
CHD1-210ENST00000513064 STAT3P40763 770 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 EPHA7Q15375 998 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 KANK2Q63ZY3 851 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 LRSAM1Q6UWE0 723 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 Q6ZUG5 572 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 NME9Q86XW9 330 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 ZDHHC14Q8IZN3 488 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 KLHL36Q8N4N3 616 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 CHTF18Q8WVB6 975 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 E2F7Q96AV8 911 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 AJUBAQ96IF1 538 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 FOXB1Q99853 325 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 KRTAP9-9Q9BYP9 154 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 KATNBL1Q9H079 304 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 BARX1Q9HBU1 254 aaPredicted RBP6.49□□□□□ -1.37
CHD1-210ENST00000513064 USP40Q9NVE5 1235 aa6.49□□□□□ -1.37
CHD1-210ENST00000513064 THG1LQ9NWX6 298 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms