RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SPATA31C1P0DKV0 1188 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 XRCC6P12956 609 aaKnown RBP eCLIP12.12□□□□□ -0.47
PFDN1-204ENST00000512707 STAT5BP51692 787 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 E2F4Q16254 413 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 DGKDQ16760 1214 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 RAD54LQ92698 747 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 COPS5Q92905 334 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 PTCH2Q9Y6C5 1203 aa12.12□□□□□ -0.47
PFDN1-204ENST00000512707 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 A0A087X0B3 334 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 ARHGEF35A5YM69 484 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 KPNA6O60684 536 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 EYA4O95677 639 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 INHAP05111 366 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 KRT18P05783 430 aaKnown RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 CAP1Q01518 475 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 PRKCEQ02156 737 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 POSTNQ15063 836 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 CAMK4Q16566 473 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 SLC9C1Q4G0N8 1177 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 UTP14CQ5TAP6 766 aaKnown RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 CCDC60Q8IWA6 550 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 NRBP2Q9NSY0 501 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 ERAP1Q9NZ08 941 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
PFDN1-204ENST00000512707 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 IGSF9BQ9UPX0 1349 aa12.11□□□□□ -0.47
PFDN1-204ENST00000512707 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 E9PMD0 336 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 LGR5O75473 907 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 MMP3P08254 477 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 PLA2G4BP0C869 781 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 YWHABP31946 246 aaKnown RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 AFMP43652 599 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 DHX8Q14562 1220 aaKnown RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 PAGE5Q96GU1 130 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 GTPBP4Q9BZE4 634 aaKnown RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 BHMT2Q9H2M3 363 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 BCAS3Q9H6U6 928 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 RMND1Q9NWS8 449 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
PFDN1-204ENST00000512707 MAFBQ9Y5Q3 323 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-204ENST00000512707 HTTP42858 3142 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 A6NJR5 290 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 OATP04181 439 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 LGALS2P05162 132 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 TRIM32Q13049 653 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 MCM6Q14566 821 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 ECM1Q16610 540 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 FSCN1Q16658 493 aaKnown RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 UGCGQ16739 394 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 NAALADL2Q58DX5 795 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 XKR9Q5GH70 373 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 SYT2Q8N9I0 419 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 PIGOQ8TEQ8 1089 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 KATNAL1Q9BW62 490 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 BLOC1S4Q9NUP1 217 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 KBTBD4Q9NVX7 518 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 TMEM63CQ9P1W3 806 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 DDX20Q9UHI6 824 aaKnown RBP12.09□□□□□ -0.47
PFDN1-204ENST00000512707 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
PFDN1-204ENST00000512707 TBCAO75347 108 aaKnown RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 MYL3P08590 195 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 CCND3P30281 292 aaPredicted RBP12.08□□□□□ -0.48
PFDN1-204ENST00000512707 GJA9P57773 515 aa12.08□□□□□ -0.48
PFDN1-204ENST00000512707 ASIC1P78348 528 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms