RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 DRC1Q96MC2 740 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 BHMT2Q9H2M3 363 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 KCND2Q9NZV8 630 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 ADAMTS1Q9UHI8 967 aa10.14□□□□□ -0.79
CPNE4-210ENST00000512332 DMGDHQ9UI17 866 aaKnown RBP10.14□□□□□ -0.79
CPNE4-210ENST00000512332 RNF40O75150 1001 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 TBCAO75347 108 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 PALMO75781 387 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 ZMYND10O75800 440 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 PSMD10O75832 226 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 AKAP3O75969 853 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 NR3C1P04150 777 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 ZNF76P36508 570 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 STAT2P52630 851 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 EPHB4P54760 987 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 JAG1P78504 1218 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 NNTQ13423 1086 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 EPHA7Q15375 998 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 IFI16Q16666 785 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 RINT1Q6NUQ1 792 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 FAM133AQ8N9E0 248 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SUPT20HQ8NEM7 779 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 CAVIN3Q969G5 261 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 BORCS6Q96GS4 357 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 MKNK1Q9BUB5 465 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 ARHGEF10LQ9HCE6 1279 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SEL1LQ9UBV2 794 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 TMX2Q9Y320 296 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 ASTN1O14525 1302 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 A0A0U1RQG5 324 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 AGPSO00116 658 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 EML1O00423 815 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 BUB1O43683 1085 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 GFPT2O94808 682 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SLITRK3O94933 977 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 MYBP10242 640 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 EPB41P11171 864 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 CAPN2P17655 700 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 NAP1L1P55209 391 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SNAP25P60880 206 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 PTK2Q05397 1052 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SF3B2Q13435 895 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 RRP1BQ14684 758 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 GBP6Q6ZN66 633 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 C1orf186Q6ZWK4 172 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 CYP2W1Q8TAV3 490 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 HDAC7Q8WUI4 952 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SLC5A5Q92911 643 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SLC35C1Q96A29 364 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 SPAG5Q96R06 1193 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 UIMC1Q96RL1 719 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 CSRNP1Q96S65 589 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 RUSC1Q9BVN2 902 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 DEFB129Q9H1M3 183 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 CWC15Q9P013 229 aaKnown RBP10.13□□□□□ -0.79
CPNE4-210ENST00000512332 INTUQ9ULD6 942 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 NENFQ9UMX5 172 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 DAAM1Q9Y4D1 1078 aa10.13□□□□□ -0.79
CPNE4-210ENST00000512332 UBE4BO95155 1302 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 NCK2O43639 380 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 IVLP07476 585 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 SLC9A1P19634 815 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 HOXA13P31271 388 aaPredicted RBP10.12□□□□□ -0.79
CPNE4-210ENST00000512332 CXCR5P32302 372 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 ZNF131P52739 623 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 JAM2P57087 298 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 APBA1Q02410 837 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 GRIPAP1Q4V328 841 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 ALS2CLQ60I27 953 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 C8orf74Q6P047 294 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 GOLGA6L1Q8N7Z2 621 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 EIF1ADQ8N9N8 165 aaKnown RBP10.12□□□□□ -0.79
CPNE4-210ENST00000512332 CHURC1Q8WUH1 139 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPNE4-210ENST00000512332 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.12□□□□□ -0.79
CPNE4-210ENST00000512332 FAM204AQ9H8W3 233 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 EHMT1Q9H9B1 1298 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 GDF3Q9NR23 364 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 NAGPAQ9UK23 515 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 SLX4Q8IY92 1834 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
CPNE4-210ENST00000512332 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 GOLGA6BA6NDN3 693 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 GCOM1H8Y6P7 765 aaPredicted RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 FLOT1O75955 427 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 POLR2MP0CAP2 368 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 GGCXP38435 758 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 EZH2Q15910 746 aaKnown RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 ZNF571Q7Z3V5 609 aaPredicted RBP10.11□□□□□ -0.79
CPNE4-210ENST00000512332 VPS36Q86VN1 386 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 FMNL3Q8IVF7 1028 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 IFT20Q8IY31 132 aa10.11□□□□□ -0.79
CPNE4-210ENST00000512332 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms