RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SAMM50Q9Y512 469 aa15.05■□□□□ -0
RNF4-215ENST00000511843 ABHD14A-ACY1A0A1B0GW23 586 aa15.04■□□□□ -0
RNF4-215ENST00000511843 LCHNA4D1U4 455 aa15.04■□□□□ -0
RNF4-215ENST00000511843 RRN3P2A6NIE6 340 aa15.04■□□□□ -0
RNF4-215ENST00000511843 SLC37A4O43826 429 aa15.04■□□□□ -0
RNF4-215ENST00000511843 GAS7O60861 476 aa15.04■□□□□ -0
RNF4-215ENST00000511843 CAND2O75155 1236 aa15.04■□□□□ -0
RNF4-215ENST00000511843 GHRP10912 638 aa15.04■□□□□ -0
RNF4-215ENST00000511843 KRT76Q01546 638 aa15.04■□□□□ -0
RNF4-215ENST00000511843 MGAT3Q09327 533 aa15.04■□□□□ -0
RNF4-215ENST00000511843 NR5A1Q13285 461 aa15.04■□□□□ -0
RNF4-215ENST00000511843 UGCGQ16739 394 aa15.04■□□□□ -0
RNF4-215ENST00000511843 LETM2Q2VYF4 491 aa15.04■□□□□ -0
RNF4-215ENST00000511843 FAM26DQ5JW98 314 aa15.04■□□□□ -0
RNF4-215ENST00000511843 GALNT17Q6IS24 598 aa15.04■□□□□ -0
RNF4-215ENST00000511843 TAF2Q6P1X5 1199 aa15.04■□□□□ -0
RNF4-215ENST00000511843 PIK3AP1Q6ZUJ8 805 aa15.04■□□□□ -0
RNF4-215ENST00000511843 KRT25Q7Z3Z0 450 aa15.04■□□□□ -0
RNF4-215ENST00000511843 MAFAQ8NHW3 353 aaPredicted RBP15.04■□□□□ -0
RNF4-215ENST00000511843 ATP8B4Q8TF62 1192 aa15.04■□□□□ -0
RNF4-215ENST00000511843 SLC5A5Q92911 643 aa15.04■□□□□ -0
RNF4-215ENST00000511843 UNC45AQ9H3U1 944 aa15.04■□□□□ -0
RNF4-215ENST00000511843 GABBR1Q9UBS5 961 aa15.04■□□□□ -0
RNF4-215ENST00000511843 TCEAL9Q9UHQ7 104 aa15.04■□□□□ -0
RNF4-215ENST00000511843 CDY2AQ9Y6F7 541 aa15.04■□□□□ -0
RNF4-215ENST00000511843 TRANK1O15050 2925 aa15.03■□□□□ -0
RNF4-215ENST00000511843 CCDC194A0A1B0GVG4 234 aa15.03■□□□□ -0
RNF4-215ENST00000511843 TLL1O43897 1013 aa15.03■□□□□ -0
RNF4-215ENST00000511843 PSAPP07602 524 aa15.03■□□□□ -0
RNF4-215ENST00000511843 KLRC1P26715 233 aa15.03■□□□□ -0
RNF4-215ENST00000511843 ADGRE1Q14246 886 aa15.03■□□□□ -0
RNF4-215ENST00000511843 LRCH2Q5VUJ6 765 aa15.03■□□□□ -0
RNF4-215ENST00000511843 MTHFD1LQ6UB35 978 aa15.03■□□□□ -0
RNF4-215ENST00000511843 CCDC83Q8IWF9 413 aa15.03■□□□□ -0
RNF4-215ENST00000511843 PHOSPHO2Q8TCD6 241 aa15.03■□□□□ -0
RNF4-215ENST00000511843 SEPT8Q92599 483 aa15.03■□□□□ -0
RNF4-215ENST00000511843 ZBED2Q9BTP6 218 aa15.03■□□□□ -0
RNF4-215ENST00000511843 TEKT3Q9BXF9 490 aa15.03■□□□□ -0
RNF4-215ENST00000511843 C22orf23Q9BZE7 217 aa15.03■□□□□ -0
RNF4-215ENST00000511843 DDX25Q9UHL0 483 aaKnown RBP15.03■□□□□ -0
RNF4-215ENST00000511843 PCDHA10Q9Y5I2 948 aa15.03■□□□□ -0
RNF4-215ENST00000511843 IGSF9BQ9UPX0 1349 aa15.02■□□□□ -0
RNF4-215ENST00000511843 CYP3A7-CYP3A51PA0A087WV96 503 aa15.02■□□□□ -0
RNF4-215ENST00000511843 EPOPA6NHQ4 379 aa15.02■□□□□ -0
RNF4-215ENST00000511843 ZBTB42B2RXF5 422 aa15.02■□□□□ -0
RNF4-215ENST00000511843 RFXAPO00287 272 aa15.02■□□□□ -0
RNF4-215ENST00000511843 ZNF862O60290 1169 aa15.02■□□□□ -0
RNF4-215ENST00000511843 HBP1O60381 514 aa15.02■□□□□ -0
RNF4-215ENST00000511843 PSMD10O75832 226 aa15.02■□□□□ -0
RNF4-215ENST00000511843 XBP1P17861 261 aa15.02■□□□□ -0
RNF4-215ENST00000511843 CYP3A7P24462 503 aa15.02■□□□□ -0
RNF4-215ENST00000511843 SLC26A2P50443 739 aa15.02■□□□□ -0
RNF4-215ENST00000511843 MRPS6P82932 125 aaKnown RBP15.02■□□□□ -0
RNF4-215ENST00000511843 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
RNF4-215ENST00000511843 LPIN1Q14693 890 aa15.02■□□□□ -0
RNF4-215ENST00000511843 Q4G0T1 1027 aa15.02■□□□□ -0
RNF4-215ENST00000511843 RSPH3Q86UC2 560 aa15.02■□□□□ -0
RNF4-215ENST00000511843 SMAP1Q8IYB5 467 aaPredicted RBP15.02■□□□□ -0
RNF4-215ENST00000511843 MYOCDQ8IZQ8 938 aa15.02■□□□□ -0
RNF4-215ENST00000511843 FAM177A1Q8N128 213 aaPredicted RBP15.02■□□□□ -0
RNF4-215ENST00000511843 ETNPPLQ8TBG4 499 aa15.02■□□□□ -0
RNF4-215ENST00000511843 WASF1Q92558 559 aa15.02■□□□□ -0
RNF4-215ENST00000511843 MBOAT7Q96N66 472 aa15.02■□□□□ -0
RNF4-215ENST00000511843 PPP1R16BQ96T49 567 aa15.02■□□□□ -0
RNF4-215ENST00000511843 RIT2Q99578 217 aa15.02■□□□□ -0
RNF4-215ENST00000511843 IFIH1Q9BYX4 1025 aaKnown RBP15.02■□□□□ -0
RNF4-215ENST00000511843 DISC1Q9NRI5 854 aa15.02■□□□□ -0
RNF4-215ENST00000511843 LIMCH1Q9UPQ0 1083 aa15.02■□□□□ -0
RNF4-215ENST00000511843 PCDHA2Q9Y5H9 948 aa15.02■□□□□ -0
RNF4-215ENST00000511843 MAFBQ9Y5Q3 323 aaPredicted RBP15.02■□□□□ -0
RNF4-215ENST00000511843 UNC80Q8N2C7 3258 aa15.02□□□□□ -0.01
RNF4-215ENST00000511843 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.01□□□□□ -0.01
RNF4-215ENST00000511843 WDR64B1ANS9 1081 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 GUCY1B3Q02153 619 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 TAP1Q03518 808 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 FBXO47Q5MNV8 452 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 NEK8Q86SG6 692 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 RPAINQ86UA6 219 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 USP38Q8NB14 1042 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 SLC17A8Q8NDX2 589 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 TNFRSF25Q93038 417 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 KIAA1671Q9BY89 1806 aa15.01□□□□□ -0.01
RNF4-215ENST00000511843 TMEM150BA6NC51 233 aa15□□□□□ -0.01
RNF4-215ENST00000511843 KIF28PB7ZC32 967 aa15□□□□□ -0.01
RNF4-215ENST00000511843 WNT7AO00755 349 aa15□□□□□ -0.01
RNF4-215ENST00000511843 CCNT1O60563 726 aaKnown RBP15□□□□□ -0.01
RNF4-215ENST00000511843 UPP2O95045 317 aa15□□□□□ -0.01
RNF4-215ENST00000511843 GJB5O95377 273 aa15□□□□□ -0.01
RNF4-215ENST00000511843 AMHP03971 560 aa15□□□□□ -0.01
RNF4-215ENST00000511843 IGFBP4P22692 258 aa15□□□□□ -0.01
RNF4-215ENST00000511843 CD52P31358 61 aa15□□□□□ -0.01
RNF4-215ENST00000511843 KRT2P35908 639 aa15□□□□□ -0.01
RNF4-215ENST00000511843 KRT40Q6A162 431 aa15□□□□□ -0.01
RNF4-215ENST00000511843 MOXD1Q6UVY6 613 aa15□□□□□ -0.01
RNF4-215ENST00000511843 MIER3Q7Z3K6 550 aa15□□□□□ -0.01
RNF4-215ENST00000511843 PPM1EQ8WY54 764 aa15□□□□□ -0.01
RNF4-215ENST00000511843 GAS2L1Q99501 681 aaPredicted RBP15□□□□□ -0.01
RNF4-215ENST00000511843 AGO3Q9H9G7 860 aaKnown RBP15□□□□□ -0.01
RNF4-215ENST00000511843 CDHR5Q9HBB8 845 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms