RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HYOU1Q9Y4L1 999 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 CPS1P31327 1500 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 H3BRJ5 948 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 K7ERI5 159 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 HADHAP40939 763 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 RAP1GDS1P52306 607 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 LBRQ14739 615 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 RRM2BQ7LG56 351 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 TRIM59Q8IWR1 403 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 NCLNQ969V3 563 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 ACAP3Q96P50 834 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 EPAS1Q99814 870 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PCIF1Q9H4Z3 704 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 MAP10Q9P2G4 905 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PI4KBQ9UBF8 816 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 PTPN22Q9Y2R2 807 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 PI4K2BG5E9Z4 385 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 CRKLP46109 303 aaKnown RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 CAPZA2P47755 286 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 KCNA1Q09470 495 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 FAM182BQ5T319 152 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 E4F1Q66K89 784 aaPredicted RBP6.22□□□□□ -1.41
USP38-203ENST00000511739 SLC26A7Q8TE54 656 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SYTL2Q9HCH5 934 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 RGL1Q9NZL6 768 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SERPINB13Q9UIV8 391 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 SAR1BQ9Y6B6 198 aa6.22□□□□□ -1.41
USP38-203ENST00000511739 TNPO2O14787 897 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 KCNQ3O43525 872 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 EIF2AK2P19525 551 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 TAC1P20366 129 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 EEF1B2P24534 225 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 MSH2P43246 934 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 CUL4AQ13619 759 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 NAA35Q5VZE5 725 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 BTBD8Q5XKL5 378 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 TMTC3Q6ZXV5 915 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 ERO1AQ96HE7 468 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 ZNF341Q9BYN7 854 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 ANTXR1Q9H6X2 564 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 SARS2Q9NP81 518 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 HOXC10Q9NYD6 342 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 SELENONQ9NZV5 590 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 FAF1Q9UNN5 650 aaPredicted RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 CRB1P82279 1406 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 NRKQ7Z2Y5 1582 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 ZNF197O14709 1029 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 C21orf2O43822 256 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 HIP1RO75146 1068 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 USP17L8P0C7I0 530 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 HSPD1P10809 573 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 U2AF2P26368 475 aaKnown RBP eCLIP6.21□□□□□ -1.41
USP38-203ENST00000511739 C16orf72Q14CZ0 275 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 PATL1Q86TB9 770 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 CCDC51Q96ER9 411 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 FSD1LQ9BXM9 530 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 CHCHD3Q9NX63 227 aaKnown RBP6.21□□□□□ -1.41
USP38-203ENST00000511739 SENP1Q9P0U3 644 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 ZKSCAN5Q9Y2L8 839 aa6.21□□□□□ -1.41
USP38-203ENST00000511739 E5RI56 91 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 PRPF4O43172 522 aaKnown RBP eCLIP6.21□□□□□ -1.42
USP38-203ENST00000511739 ZBED1O96006 694 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SETSIPP0DME0 302 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SLC16A2P36021 539 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SESN3P58005 492 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 ART3Q13508 389 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 CDO1Q16878 200 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TRMT10CQ7L0Y3 403 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 EFHBQ8N7U6 833 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 OPTNQ96CV9 577 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 SPON2Q9BUD6 331 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TRIM54Q9BYV2 358 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 PPP1R9AQ9ULJ8 1098 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 NPM3O75607 178 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 ZBTB7AO95365 584 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 PCP11498 1178 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 DDX5P17844 614 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 GTF2H3Q13889 308 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 KIF19Q2TAC6 998 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 RNF207Q6ZRF8 634 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 THNSL1Q8IYQ7 743 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 GIMAP8Q8ND71 665 aaPredicted RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 DEPDC1BQ8WUY9 529 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 MAGOHBQ96A72 148 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 EAF2Q96CJ1 260 aaPredicted RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 OTUB1Q96FW1 271 aaPredicted RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 LMBRD1Q9NUN5 540 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 MAP3K20Q9NYL2 800 aaKnown RBP6.21□□□□□ -1.42
USP38-203ENST00000511739 ATP10DQ9P241 1426 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 ZNF263O14978 683 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 DNAJC6O75061 913 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TOM1L1O75674 476 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 ASNSP08243 561 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 NR2F2P24468 414 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 TNFAIP2Q03169 654 aa6.21□□□□□ -1.42
USP38-203ENST00000511739 EIF2B5Q13144 721 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms