RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 STX17P56962 302 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 GSDMDP57764 484 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 ACTR2P61160 394 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 ALCAMQ13740 583 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 GRB14Q14449 540 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 BMT2Q1RMZ1 405 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 ABHD15Q6UXT9 468 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 DRC7Q8IY82 874 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 RUSC1Q9BVN2 902 aa16.86■□□□□ 0.29
SCLT1-209ENST00000511426 SAMSN1Q9NSI8 373 aaKnown RBP16.86■□□□□ 0.29
SCLT1-209ENST00000511426 LIMA1Q9UHB6 759 aaKnown RBP16.86■□□□□ 0.29
SCLT1-209ENST00000511426 SUPT20HL2P0C7V6 817 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 UBA1P22314 1058 aaKnown RBP16.85■□□□□ 0.29
SCLT1-209ENST00000511426 ADORA2AP29274 412 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 MAMDC4Q6UXC1 1216 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-209ENST00000511426 IGKV6D-21A0A0A0MT36 114 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 A0A1B0GTH6 734 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 SLC15A5A6NIM6 579 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 KIF3CO14782 793 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-209ENST00000511426 SEPT14Q6ZU15 432 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 GPR142Q7Z601 462 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 CSGALNACT2Q8N6G5 542 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 DRC1Q96MC2 740 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 C17orf75Q9HAS0 396 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 LARSQ9P2J5 1176 aaKnown RBP16.85■□□□□ 0.29
SCLT1-209ENST00000511426 KCNG1Q9UIX4 513 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 MAPK8IP1Q9UQF2 711 aa16.85■□□□□ 0.29
SCLT1-209ENST00000511426 TMEM88BA6NKF7 163 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 PGK2P07205 417 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 TPM2P07951 284 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-209ENST00000511426 SCP2P22307 547 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 ABCD1P33897 745 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 TTLL4Q14679 1199 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 EDRF1Q3B7T1 1238 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 ZCWPW2Q504Y3 356 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 XKR3Q5GH77 459 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 TCP11X2Q5H9J9 407 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 PADI6Q6TGC4 694 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 EPM2AIP1Q7L775 607 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-209ENST00000511426 IFNL1Q8IU54 200 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-209ENST00000511426 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 SCFD2Q8WU76 684 aa16.84■□□□□ 0.29
SCLT1-209ENST00000511426 MAFBQ9Y5Q3 323 aaPredicted RBP16.84■□□□□ 0.29
SCLT1-209ENST00000511426 SYNGAP1Q96PV0 1343 aa16.83■□□□□ 0.29
SCLT1-209ENST00000511426 TOMM70O94826 608 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 GNA14O95837 355 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
SCLT1-209ENST00000511426 SP2Q02086 613 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 FSTL1Q12841 308 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 TAF1CQ15572 869 aaPredicted RBP16.83■□□□□ 0.28
SCLT1-209ENST00000511426 FAM160B1Q5W0V3 765 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 SFR1Q86XK3 245 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 CEP63Q96MT8 703 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 ZFYVE28Q9HCC9 887 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 GABBR1Q9UBS5 961 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
SCLT1-209ENST00000511426 PLXNB2O15031 1838 aa16.83■□□□□ 0.28
SCLT1-209ENST00000511426 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
SCLT1-209ENST00000511426 KCNJ18B7U540 433 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 IGF2BP3O00425 579 aaKnown RBP eCLIP16.82■□□□□ 0.28
SCLT1-209ENST00000511426 TLR2O60603 784 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 SLC26A2P50443 739 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 PMS1P54277 932 aaKnown RBP16.82■□□□□ 0.28
SCLT1-209ENST00000511426 KCNJ12Q14500 433 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 NR1I3Q14994 352 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 ANKRD40Q6AI12 368 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 CCDC62Q6P9F0 684 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 ARMCX2Q7L311 632 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 APTXQ7Z2E3 356 aaKnown RBP16.82■□□□□ 0.28
SCLT1-209ENST00000511426 ZSCAN30Q86W11 494 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 MCPH1Q8NEM0 835 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 SCFD1Q8WVM8 642 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 SEPT1Q8WYJ6 367 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 FAM167AQ96KS9 214 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
SCLT1-209ENST00000511426 SEMA6BQ9H3T3 888 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
SCLT1-209ENST00000511426 NPHP3-ACAD11A0A0J9YXS1 232 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 RBM47A0AV96 593 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 PDXKO00764 312 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 DGAT1O75907 488 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 ALDH1A1P00352 501 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 TM4SF4P48230 202 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 RTP1P59025 263 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 NFIL3Q16649 462 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 UGCGQ16739 394 aa16.81■□□□□ 0.28
SCLT1-209ENST00000511426 KNOP1Q1ED39 458 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 CELF3Q5SZQ8 465 aaKnown RBP16.81■□□□□ 0.28
SCLT1-209ENST00000511426 SWSAP1Q6NVH7 229 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms