RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.04■■□□□ 1.76
SNF8-209ENST00000510558 LINC01553A4QN01 128 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 HBP1O60381 514 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 USP11P51784 963 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 KRT76Q01546 638 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 LPIN1Q14693 890 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 SWSAP1Q6NVH7 229 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 BLIDQ8IZY5 108 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 FAM177A1Q8N128 213 aaPredicted RBP26.04■■□□□ 1.76
SNF8-209ENST00000510558 MICALL1Q8N3F8 863 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 ATP8B4Q8TF62 1192 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 COL25A1Q9BXS0 654 aaPredicted RBP26.04■■□□□ 1.76
SNF8-209ENST00000510558 C22orf23Q9BZE7 217 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 TPCN1Q9ULQ1 816 aa26.04■■□□□ 1.76
SNF8-209ENST00000510558 GTPBP6O43824 516 aaPredicted RBP26.03■■□□□ 1.76
SNF8-209ENST00000510558 CDKL5O76039 1030 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 POU3F3P20264 500 aaPredicted RBP26.03■■□□□ 1.76
SNF8-209ENST00000510558 HTRA4P83105 476 aaPredicted RBP26.03■■□□□ 1.76
SNF8-209ENST00000510558 FBXO47Q5MNV8 452 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 MTHFD1LQ6UB35 978 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 SMAP1Q8IYB5 467 aaPredicted RBP26.03■■□□□ 1.76
SNF8-209ENST00000510558 DAGLBQ8NCG7 672 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 TBCKQ8TEA7 893 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 MTCH2Q9Y6C9 303 aa26.03■■□□□ 1.76
SNF8-209ENST00000510558 M0R2N6 131 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 PFKFB2O60825 505 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 NPY5RQ15761 445 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 IER5Q5VY09 327 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 GALNT17Q6IS24 598 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 TOP1MTQ969P6 601 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 TGS1Q96RS0 853 aaKnown RBP26.02■■□□□ 1.76
SNF8-209ENST00000510558 PCDHA10Q9Y5I2 948 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 TRPV2Q9Y5S1 764 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 COL1A2P08123 1366 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 CUL9Q8IWT3 2517 aa26.02■■□□□ 1.76
SNF8-209ENST00000510558 SMIM35A0A1B0GVV1 85 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 M0QZ92 97 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 TRANK1O15050 2925 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 MSH4O15457 936 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 UPP2O95045 317 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 PSAPP07602 524 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 ATP4AP20648 1035 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 KLRC1P26715 233 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 AK2P54819 239 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 ERVK-21P61565 698 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 TMEM62Q0P6H9 643 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 GRB10Q13322 594 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 ANKRD1Q15327 319 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 TSHZ1Q6ZSZ6 1077 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 CKAP2LQ8IYA6 745 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 IL17RAQ96F46 866 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 MTUS1Q9ULD2 1270 aa26.01■■□□□ 1.75
SNF8-209ENST00000510558 MAFBQ9Y5Q3 323 aaPredicted RBP26.01■■□□□ 1.75
SNF8-209ENST00000510558 STK36Q9NRP7 1315 aa26■■□□□ 1.75
SNF8-209ENST00000510558 EIF5BO60841 1220 aaKnown RBP26■■□□□ 1.75
SNF8-209ENST00000510558 KRT40Q6A162 431 aa26■■□□□ 1.75
SNF8-209ENST00000510558 SP7Q8TDD2 431 aaPredicted RBP26■■□□□ 1.75
SNF8-209ENST00000510558 YME1L1Q96TA2 773 aa26■■□□□ 1.75
SNF8-209ENST00000510558 KCNJ14Q9UNX9 436 aa26■■□□□ 1.75
SNF8-209ENST00000510558 SAMM50Q9Y512 469 aa26■■□□□ 1.75
SNF8-209ENST00000510558 WDR64B1ANS9 1081 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 LPXNO60711 386 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 ZNF484Q5JVG2 852 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 GDPD5Q8WTR4 605 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 BBXQ8WY36 941 aaPredicted RBP25.99■■□□□ 1.75
SNF8-209ENST00000510558 SLC5A5Q92911 643 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 RIT2Q99578 217 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 AGO3Q9H9G7 860 aaKnown RBP25.99■■□□□ 1.75
SNF8-209ENST00000510558 THEGQ9P2T0 379 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 GABBR1Q9UBS5 961 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 SQORQ9Y6N5 450 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 NLRC5Q86WI3 1866 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 COL4A6Q14031 1691 aa25.99■■□□□ 1.75
SNF8-209ENST00000510558 IGSF9BQ9UPX0 1349 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 ZBTB42B2RXF5 422 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 GAS7O60861 476 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 TDP2O95551 362 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 CD52P31358 61 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 Q4G0T1 1027 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 NME8Q8N427 588 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 PHF20Q9BVI0 1012 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 CELF4Q9BZC1 486 aaKnown RBP25.98■■□□□ 1.75
SNF8-209ENST00000510558 SUGCTQ9HAC7 445 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 TTC3P53804 2025 aa25.98■■□□□ 1.75
SNF8-209ENST00000510558 KDM3AQ9Y4C1 1321 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 DTNBO60941 627 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 NONOQ15233 471 aaKnown RBP eCLIP25.97■■□□□ 1.75
SNF8-209ENST00000510558 LRCH2Q5VUJ6 765 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 KRT25Q7Z3Z0 450 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 TEKT3Q9BXF9 490 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 DISC1Q9NRI5 854 aa25.97■■□□□ 1.75
SNF8-209ENST00000510558 RALGAPA2Q2PPJ7 1873 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 CYP3A7-CYP3A51PA0A087WV96 503 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 CTDNEP1O95476 244 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 XBP1P17861 261 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 CYP3A7P24462 503 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 TRMT1LQ7Z2T5 733 aaKnown RBP25.96■■□□□ 1.75
SNF8-209ENST00000510558 ATXN2LQ8WWM7 1075 aaKnown RBP25.96■■□□□ 1.75
SNF8-209ENST00000510558 GJA10Q969M2 543 aa25.96■■□□□ 1.75
SNF8-209ENST00000510558 C17orf80Q9BSJ5 609 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms