RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 C16orf59Q7L2K0 433 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 MIER3Q7Z3K6 550 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 RSPH3Q86UC2 560 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 POTEDQ86YR6 584 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 MTIF3Q9H2K0 278 aaKnown RBP19.44■□□□□ 0.7
CLDND1-221ENST00000510541 NRBP2Q9NSY0 501 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 KDM3AQ9Y4C1 1321 aa19.44■□□□□ 0.7
CLDND1-221ENST00000510541 ZBTB42B2RXF5 422 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 DDX39AO00148 427 aaKnown RBP19.43■□□□□ 0.7
CLDND1-221ENST00000510541 DTNBO60941 627 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 EFCAB14O75071 495 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 BAIAP3O94812 1187 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 PRPHP41219 470 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 PSMC5P62195 406 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 TARBP2Q15633 366 aaKnown RBP19.43■□□□□ 0.7
CLDND1-221ENST00000510541 CALCRLQ16602 461 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 XKR3Q5GH77 459 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 LARP1BQ659C4 914 aaKnown RBP19.43■□□□□ 0.7
CLDND1-221ENST00000510541 BRAPQ7Z569 592 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 C4orf19Q8IY42 314 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 EXOC8Q8IYI6 725 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 PPP1R12CQ9BZL4 782 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 GABBR1Q9UBS5 961 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 SAMM50Q9Y512 469 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 STK24Q9Y6E0 443 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 UMODL1Q5DID0 1318 aa19.43■□□□□ 0.7
CLDND1-221ENST00000510541 KIF28PB7ZC32 967 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 ZNF862O60290 1169 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
CLDND1-221ENST00000510541 QARSP47897 775 aaKnown RBP19.42■□□□□ 0.7
CLDND1-221ENST00000510541 ZNF200P98182 395 aaPredicted RBP19.42■□□□□ 0.7
CLDND1-221ENST00000510541 GUCY1B3Q02153 619 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 GNL2Q13823 731 aaKnown RBP19.42■□□□□ 0.7
CLDND1-221ENST00000510541 PDIA5Q14554 519 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 KCTD17Q8N5Z5 321 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 USP38Q8NB14 1042 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 HSD17B14Q9BPX1 270 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 TRPC6Q9Y210 931 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 MORC2Q9Y6X9 1032 aaPredicted RBP19.42■□□□□ 0.7
CLDND1-221ENST00000510541 LAMA3Q16787 3333 aa19.42■□□□□ 0.7
CLDND1-221ENST00000510541 RSPH10B2B2RC85 870 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 H3BQV1 296 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 STBD1O95210 358 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 FGBP02675 491 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 OATP04181 439 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 RSPH10BP0C881 870 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 MARK3P27448 753 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
CLDND1-221ENST00000510541 EPHB4P54760 987 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 SMAD3P84022 425 aaKnown RBP19.41■□□□□ 0.7
CLDND1-221ENST00000510541 CDC42EP1Q00587 391 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 GPNMBQ14956 572 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 TTC38Q5R3I4 469 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 ZNF618Q5T7W0 954 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 MTHFD1LQ6UB35 978 aa19.41■□□□□ 0.7
CLDND1-221ENST00000510541 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLDND1-221ENST00000510541 TTC12Q9H892 705 aaPredicted RBP19.41■□□□□ 0.7
CLDND1-221ENST00000510541 EML1O00423 815 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 WNT7AO00755 349 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 BMP15O95972 392 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 ACTN1P12814 892 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 FXR2P51116 673 aaKnown RBP eCLIP19.4■□□□□ 0.7
CLDND1-221ENST00000510541 CCL23P55773 120 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 CHMP4BP1P59074 171 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 SHHQ15465 462 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 LINC01465Q8N7H1 131 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 PHOSPHO2Q8TCD6 241 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 WNT8BQ93098 351 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 CEP89Q96ST8 783 aa19.4■□□□□ 0.7
CLDND1-221ENST00000510541 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.4■□□□□ 0.7
CLDND1-221ENST00000510541 TMEM265A0A087WTH1 108 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 IGKV6-21A0A0C4DH24 114 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 MARCH6O60337 910 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 C22orf31O95567 290 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 OR52Z1P0C646 297 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 KLRC1P26715 233 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 PRKCEQ02156 737 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 MGAT3Q09327 533 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 MKRN4PQ13434 485 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-221ENST00000510541 IER5Q5VY09 327 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 ARL6IP4Q66PJ3 421 aaKnown RBP19.39■□□□□ 0.69
CLDND1-221ENST00000510541 FAM109BQ6ICB4 259 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-221ENST00000510541 ZNF365Q70YC5 407 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 HSCBQ8IWL3 235 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 APBB2Q92870 758 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 JPH2Q9BR39 696 aaPredicted RBP19.39■□□□□ 0.69
CLDND1-221ENST00000510541 ZSWIM4Q9H7M6 989 aa19.39■□□□□ 0.69
CLDND1-221ENST00000510541 ABHD14A-ACY1A0A1B0GW23 586 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 GAS2O43903 313 aaKnown RBP19.38■□□□□ 0.69
CLDND1-221ENST00000510541 NBNO60934 754 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 MCM7P33993 719 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 THPOP40225 353 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 FXR1P51114 621 aaKnown RBP eCLIP19.38■□□□□ 0.69
CLDND1-221ENST00000510541 PLEKHG4Q58EX7 1191 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 C9orf50Q5SZB4 431 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 CNKSR3Q6P9H4 555 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 SCLYQ96I15 445 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 TMEM60Q9H2L4 133 aa19.38■□□□□ 0.69
CLDND1-221ENST00000510541 LAMA2P24043 3122 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms