RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 BCS1LQ9Y276 419 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.39□□□□□ -0.59
NEK1-206ENST00000510533 TYW5A2RUC4 315 aaKnown RBP11.39□□□□□ -0.59
NEK1-206ENST00000510533 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 PLEKHA8P1O95397 391 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 NT5C2P49902 561 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 MTERF2Q49AM1 385 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 SYT2Q8N9I0 419 aaPredicted RBP11.39□□□□□ -0.59
NEK1-206ENST00000510533 MIF4GDA9UHW6 222 aaKnown RBP11.39□□□□□ -0.59
NEK1-206ENST00000510533 MYO1EQ12965 1108 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 TOB2Q14106 344 aaPredicted RBP11.39□□□□□ -0.59
NEK1-206ENST00000510533 NLGN1Q8N2Q7 840 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 ANLNQ9NQW6 1124 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 SLC12A6Q9UHW9 1150 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 SNX24Q9Y343 169 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
NEK1-206ENST00000510533 MYO1CO00159 1063 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 NVLO15381 856 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 SRGAP2O75044 1071 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 TADA3O75528 432 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 LMNAP02545 664 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 LTKP29376 864 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 TADA2BQ86TJ2 420 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 CRLF3Q8IUI8 442 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 CHMP6Q96FZ7 201 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 GOLGA8IPA6NC78 632 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 GOLGA8JA6NMD2 632 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 KRT37O76014 449 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 TJP3O95049 919 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 PSAPP07602 524 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 EEF1B2P24534 225 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 CTTNQ14247 550 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 DGKHQ86XP1 1220 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 DCPSQ96C86 337 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 RASGRF1Q13972 1273 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEK1-206ENST00000510533 MMS22LQ6ZRQ5 1243 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 SRRM1Q8IYB3 904 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 ST13P4Q8IZP2 240 aaPredicted RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 TTC1Q99614 292 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 KRT82Q9NSB4 513 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 DNAJC12Q9UKB3 198 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 PTCH1Q13635 1447 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 DISP1Q96F81 1524 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 BBOX1O75936 387 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 MECOMQ03112 1051 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 ERICH1Q86X53 443 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEK1-206ENST00000510533 HEXIM2Q96MH2 286 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 TRIM55Q9BYV6 548 aa11.38□□□□□ -0.59
NEK1-206ENST00000510533 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 CPSF3Q9UKF6 684 aaKnown RBP11.38□□□□□ -0.59
NEK1-206ENST00000510533 XPAP23025 273 aaPredicted RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 GGCXP38435 758 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 CCNA1P78396 465 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 GRAMD1BQ3KR37 738 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 STK36Q9NRP7 1315 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 SPAG7O75391 227 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 HP1BP3Q5SSJ5 553 aaPredicted RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 PROM2Q8N271 834 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 CENPKQ9BS16 269 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 A0A0G2JND7 137 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 ERVV-1B6SEH8 477 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 PSMA2P25787 234 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 CDK8P49336 464 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 ARL4CP56559 192 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 BZW1Q7L1Q6 419 aaKnown RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 DPP9Q86TI2 863 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 ABTB1Q969K4 478 aaPredicted RBP11.37□□□□□ -0.59
NEK1-206ENST00000510533 NRBF2Q96F24 287 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 MXD3Q9BW11 206 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 TRIM49BA6NDI0 452 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 COPEO14579 308 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 ATP5HO75947 161 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 SLC4A1P02730 911 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 OSTNP61366 133 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 TMPRSS15P98073 1019 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 SLFN12LQ6IEE8 588 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 SCARA5Q6ZMJ2 495 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 TTC17Q96AE7 1141 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 FAF2Q96CS3 445 aa11.37□□□□□ -0.59
NEK1-206ENST00000510533 MSTO1Q9BUK6 570 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms