RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
DDX41-211ENST00000510171 IGSF9BQ9UPX0 1349 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 hCG_1642624A0A1W2PR95 340 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 PPFIA3O75145 1194 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 SCG2P13521 617 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 MCM5P33992 734 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 NRIP1P48552 1158 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 STAT5BP51692 787 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 ACTR2P61160 394 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 KRT76Q01546 638 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
DDX41-211ENST00000510171 COASYQ13057 564 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 PLCB4Q15147 1175 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 FAM43BQ6ZT52 329 aaPredicted RBP11.91□□□□□ -0.5
DDX41-211ENST00000510171 HEATR3Q7Z4Q2 680 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 BMP8AQ7Z5Y6 402 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 CCDC82Q8N4S0 544 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 MICAL1Q8TDZ2 1067 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 KCNH7Q9NS40 1196 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 PCDHB7Q9Y5E2 793 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 SLC12A7Q9Y666 1083 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 MICAL3Q7RTP6 2002 aa11.91□□□□□ -0.5
DDX41-211ENST00000510171 SMIM35A0A1B0GVV1 85 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 TMEM221A6NGB7 291 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 LOC730098B7Z3J9 87 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 M0R296 226 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 SH2B2O14492 632 aaPredicted RBP11.9□□□□□ -0.5
DDX41-211ENST00000510171 RXRAP19793 462 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 IBSPP21815 317 aaPredicted RBP11.9□□□□□ -0.5
DDX41-211ENST00000510171 LIFRP42702 1097 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 SARSP49591 514 aaKnown RBP11.9□□□□□ -0.5
DDX41-211ENST00000510171 PKN1Q16512 942 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 SPOUT1Q5T280 376 aaKnown RBP11.9□□□□□ -0.5
DDX41-211ENST00000510171 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 FANCBQ8NB91 859 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 SMRP1Q8NCR6 262 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 TRAPPC12Q8WVT3 735 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 TMX1Q9H3N1 280 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 TLE6Q9H808 572 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 AAASQ9NRG9 546 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
DDX41-211ENST00000510171 GINS2Q9Y248 185 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.5
DDX41-211ENST00000510171 MYH7BA7E2Y1 1941 aa11.9□□□□□ -0.51
DDX41-211ENST00000510171 NFASCO94856 1347 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 KDM3AQ9Y4C1 1321 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 ARP10275 920 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 KLRC1P26715 233 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 GATMP50440 423 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 SLC26A2P50443 739 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
DDX41-211ENST00000510171 ZXDAP98168 799 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 UBE3AQ05086 875 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 TMEM266Q2M3C6 531 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 PHF7Q9BWX1 381 aaPredicted RBP11.89□□□□□ -0.51
DDX41-211ENST00000510171 BARX2Q9UMQ3 279 aaPredicted RBP11.89□□□□□ -0.51
DDX41-211ENST00000510171 USP15Q9Y4E8 981 aaPredicted RBP11.89□□□□□ -0.51
DDX41-211ENST00000510171 MUC6Q6W4X9 2439 aa11.89□□□□□ -0.51
DDX41-211ENST00000510171 DENND3A2RUS2 1198 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 TBKBP1A7MCY6 615 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 PER2O15055 1255 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 HBP1O60381 514 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 RPS6KA5O75582 802 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 ATG7O95352 703 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 GLP2RO95838 553 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 CBX2Q14781 532 aaPredicted RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 CEP55Q53EZ4 464 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 IER5LQ5T953 404 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 PDE12Q6L8Q7 609 aaKnown RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 SYNE3Q6ZMZ3 975 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 SLC24A5Q71RS6 500 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 SUGP1Q8IWZ8 645 aaKnown RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 RPGRIP1Q96KN7 1286 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 CDCA3Q99618 268 aaPredicted RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 PRRX2Q99811 253 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 ADAM2Q99965 735 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 AGO4Q9HCK5 861 aaKnown RBP11.88□□□□□ -0.51
DDX41-211ENST00000510171 ERVK-5Q9HDB9 667 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 RGS18Q9NS28 235 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 C1orf112Q9NSG2 853 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 PCDHGC5Q9Y5F6 944 aa11.88□□□□□ -0.51
DDX41-211ENST00000510171 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 FSD2A1L4K1 749 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 MEIS1O00470 390 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 BACH1O14867 736 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 GPR182O15218 404 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 MGEA5O60502 916 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 FGF18O76093 207 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 ZNF76P36508 570 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 PTPN5P54829 565 aa11.87□□□□□ -0.51
DDX41-211ENST00000510171 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms