RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ZNF577Q9BSK1 485 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 SLC26A6Q9BXS9 759 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 UBE2ZQ9H832 354 aaPredicted RBP11.53□□□□□ -0.56
SCARB2-204ENST00000509994 LRFN2Q9ULH4 789 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 SAMM50Q9Y512 469 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 TRPV2Q9Y5S1 764 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 SNX14Q9Y5W7 946 aa11.53□□□□□ -0.56
SCARB2-204ENST00000509994 WDR81Q562E7 1941 aa11.52□□□□□ -0.56
SCARB2-204ENST00000509994 KIAA1671Q9BY89 1806 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 MBLAC1A4D2B0 266 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-204ENST00000509994 GNA11P29992 359 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 SETQ01105 290 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-204ENST00000509994 KRT76Q01546 638 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 MGAT3Q09327 533 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 FUT2Q10981 343 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 ITGB3BPQ13352 177 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-204ENST00000509994 BTG3Q14201 252 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-204ENST00000509994 MARCH8Q5T0T0 291 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 MCTP2Q6DN12 878 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 TEX2Q8IWB9 1127 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 CCDC148Q8NFR7 591 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 BICD2Q8TD16 824 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 SP7Q8TDD2 431 aaPredicted RBP11.52□□□□□ -0.57
SCARB2-204ENST00000509994 PPP1R16BQ96T49 567 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 PCYT2Q99447 389 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.57
SCARB2-204ENST00000509994 BDP1A6H8Y1 2624 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 IPO5O00410 1097 aaKnown RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 MEIS1O00470 390 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 CPLX1O14810 134 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 RPS6KB1P23443 525 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 HSPA4P34932 840 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 SLC26A2P50443 739 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 NFX1Q12986 1120 aaKnown RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 PAN2Q504Q3 1202 aaKnown RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 PRR16Q569H4 304 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 SPOUT1Q5T280 376 aaKnown RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 NIPA1Q7RTP0 329 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 RPAINQ86UA6 219 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 TRIM22Q8IYM9 498 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 RASGRP4Q8TDF6 673 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
SCARB2-204ENST00000509994 RWDD3Q9Y3V2 267 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 PCDHA2Q9Y5H9 948 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 TTC3P53804 2025 aa11.51□□□□□ -0.57
SCARB2-204ENST00000509994 ATG2AQ2TAZ0 1938 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 DENND3A2RUS2 1198 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 FAM86B1E9PN63 330 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 H3BNC9 293 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 ENPP3O14638 875 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 PRPF3O43395 683 aaKnown RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 HBP1O60381 514 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 PSAPP07602 524 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 FAM86B2P0C5J1 330 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 STAG3L1P0CL83 205 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 COL9A1P20849 921 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 KLRC1P26715 233 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 CLK2P49760 499 aaKnown RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 NLRP5P59047 1200 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 TMEM266Q2M3C6 531 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 CCDC60Q8IWA6 550 aaPredicted RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 BANK1Q8NDB2 785 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 FTHL17Q9BXU8 183 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 CELF4Q9BZC1 486 aaKnown RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 NSUN3Q9H649 340 aaKnown RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
SCARB2-204ENST00000509994 CLDND1Q9NY35 253 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 VPS54Q9P1Q0 977 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 MUC3AQ02505 3323 aa11.5□□□□□ -0.57
SCARB2-204ENST00000509994 COL4A6Q14031 1691 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 ESYT2A0FGR8 921 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 H3BQ06 376 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-204ENST00000509994 CHMP2AO43633 222 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 CCNE2O96020 404 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
SCARB2-204ENST00000509994 STK3Q13188 491 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 TCEAL5Q5H9L2 206 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 ZNF484Q5JVG2 852 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 PTCRAQ6ISU1 281 aaPredicted RBP11.49□□□□□ -0.57
SCARB2-204ENST00000509994 NPAS4Q8IUM7 802 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 NME8Q8N427 588 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 ZMYND12Q9H0C1 365 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 AGO3Q9H9G7 860 aaKnown RBP11.49□□□□□ -0.57
SCARB2-204ENST00000509994 TBC1D22BQ9NU19 505 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 PADI3Q9ULW8 664 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 CYP46A1Q9Y6A2 500 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 MYO7AQ13402 2215 aa11.49□□□□□ -0.57
SCARB2-204ENST00000509994 GAS7O60861 476 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms