RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	LLGL2	Q6P1M3	1020 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	LIAT1	Q6ZQX7	453 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	GPR161	Q8N6U8	529 aa	Known RBP	11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	PPTC7	Q8NI37	304 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	RASGRP4	Q8TDF6	673 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	NECTIN4	Q96NY8	510 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	NCDN	Q9UBB6	729 aa		11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	DDX41	Q9UJV9	622 aa	Known RBP	11.31	□□□□□ -0.6
PTPN20-223	ENST00000509900	C17orf102	A2RUQ5	167 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	SOBP	A7XYQ1	873 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	FSCN2	O14926	492 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	TGM1	P22735	817 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	SMYD5	Q6GMV2	418 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	AACS	Q86V21	672 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	SCUBE3	Q8IX30	993 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	TDRD5	Q8NAT2	981 aa	Known RBP	11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	LINC01599	Q8WXQ3	324 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	DNAJC2	Q99543	621 aa	Known RBP	11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	ADAM7	Q9H2U9	754 aa		11.3	□□□□□ -0.6
PTPN20-223	ENST00000509900	MINDY4B	A8MYZ0	360 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900		B4DLN1	442 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	KIN	O60870	393 aa	Known RBP	11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	CHRNA1	P02708	482 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	WEE2	P0C1S8	567 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	SMIM10L2A	P0DMW4	78 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	SMIM10L2B	P0DMW5	78 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	GHR	P10912	638 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	GATM	P50440	423 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	MRPL12	P52815	198 aa	Known RBP	11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	UBE3A	Q05086	875 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	LAMC2	Q13753	1193 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	NEDD1	Q8NHV4	660 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	C16orf70	Q9BSU1	422 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	RNPEP	Q9H4A4	650 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	EHMT1	Q9H9B1	1298 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	FBXL21	Q9UKT6	434 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	DUSP12	Q9UNI6	340 aa		11.29	□□□□□ -0.6
PTPN20-223	ENST00000509900	DOCK8	Q8NF50	2099 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	KRBA1	A5PL33	1030 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	PPFIA4	O75335	1185 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	FECH	P22830	423 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	SLC16A2	P36021	539 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	ATP8B2	P98198	1209 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	TBC1D8B	Q0IIM8	1120 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	TDG	Q13569	410 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	LPIN1	Q14693	890 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	TTBK2	Q6IQ55	1244 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	CES5A	Q6NT32	575 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	RDH13	Q8NBN7	331 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	PUS7L	Q9H0K6	701 aa	Known RBP	11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	MRS2	Q9HD23	443 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	DLGAP2	Q9P1A6	1054 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	ANGPTL2	Q9UKU9	493 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	NAV2	Q8IVL1	2488 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	NBEA	Q8NFP9	2946 aa		11.28	□□□□□ -0.6
PTPN20-223	ENST00000509900	GSG1L2	A8MUP6	293 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	FGF18	O76093	207 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	MTHFR	P42898	656 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	ITIH3	Q06033	890 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	APOBR	Q0VD83	1088 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	HSDL1	Q3SXM5	330 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	TPRN	Q4KMQ1	711 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	PLPP4	Q5VZY2	271 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	PDE12	Q6L8Q7	609 aa	Known RBP	11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	C1orf210	Q8IVY1	113 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	SPSB2	Q99619	263 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	PARD6A	Q9NPB6	346 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	TNN	Q9UQP3	1299 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	UST	Q9Y2C2	406 aa		11.27	□□□□□ -0.61
PTPN20-223	ENST00000509900	HIDE1	A8MVS5	230 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	NARS	O43776	548 aa	Known RBP	11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	SORBS3	O60504	671 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	EOMES	O95936	686 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PROS1	P07225	676 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	DCN	P07585	359 aa	Known RBP	11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	TSPY3	P0CV98	308 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	TSPY8	P0CW00	308 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PML	P29590	882 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PRR20E	P86478	221 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PRR20C	P86479	221 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PRR20D	P86480	221 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PRR20B	P86481	221 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PRR20A	P86496	221 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	SLFN5	Q08AF3	891 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	UBE3C	Q15386	1083 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	SPECC1	Q5M775	1068 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	PLA2G2C	Q5R387	149 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	MYSM1	Q5VVJ2	828 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	BTNL9	Q6UXG8	535 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	NPAS4	Q8IUM7	802 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	FEZF2	Q8TBJ5	459 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	TBC1D17	Q9HA65	648 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	CYP26B1	Q9NR63	512 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	AAAS	Q9NRG9	546 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	SETD4	Q9NVD3	440 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	COL20A1	Q9P218	1284 aa		11.26	□□□□□ -0.61
PTPN20-223	ENST00000509900	USP18	Q9UMW8	372 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms