RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CDC27P30260 824 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 APOA5Q6Q788 366 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 IGFLR1Q9H665 355 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 AGO4Q9HCK5 861 aaKnown RBP18.22■□□□□ 0.51
RAB40C-202ENST00000509637 JPH1Q9HDC5 661 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-202ENST00000509637 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 PCDHA2Q9Y5H9 948 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 TRPV2Q9Y5S1 764 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 IGSF9BQ9UPX0 1349 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 EVPLQ92817 2033 aa18.22■□□□□ 0.51
RAB40C-202ENST00000509637 TECTAO75443 2155 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 STXBP3O00186 592 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 MEIS1O00470 390 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 MAFGO15525 162 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 DHX15O43143 795 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 EDIL3O43854 480 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 MMP1P03956 469 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 CLK2P49760 499 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 RBM10P98175 930 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 SMAD2Q15796 467 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 PUS10Q3MIT2 529 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 PAN2Q504Q3 1202 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 ADHFE1Q8IWW8 467 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 CRYGNQ8WXF5 182 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 MSLNLQ96KJ4 702 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 C11orf84Q9BUA3 381 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 ANO3Q9BYT9 981 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 LMAN2LQ9H0V9 348 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 HCN4Q9Y3Q4 1203 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 V9GY48 417 aaPredicted RBP18.21■□□□□ 0.51
RAB40C-202ENST00000509637 NFASCO94856 1347 aa18.21■□□□□ 0.51
RAB40C-202ENST00000509637 PLXNA4Q9HCM2 1894 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 RRN3P2A6NIE6 340 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 SPDYE3A6NKU9 549 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 DCXO43602 365 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 GLP2RO95838 553 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 CALM1P0DP23 149 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 CALM2P0DP24 149 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 CALM3P0DP25 149 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 STAT5BP51692 787 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 MTHFD1LQ6UB35 978 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 ABHD15Q6UXT9 468 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 PLPPR4Q7Z2D5 763 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 RSPH3Q86UC2 560 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 KIAA0319LQ8IZA0 1049 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 NOC2LQ9Y3T9 749 aaKnown RBP18.2■□□□□ 0.5
RAB40C-202ENST00000509637 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
RAB40C-202ENST00000509637 ZNF318Q5VUA4 2279 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 FAM86B1E9PN63 330 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
RAB40C-202ENST00000509637 FAM86B2P0C5J1 330 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 KLRC1P26715 233 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 CEP55Q53EZ4 464 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 NPAS4Q8IUM7 802 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 CCDC60Q8IWA6 550 aaPredicted RBP18.19■□□□□ 0.5
RAB40C-202ENST00000509637 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
RAB40C-202ENST00000509637 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 KDM3AQ9Y4C1 1321 aa18.19■□□□□ 0.5
RAB40C-202ENST00000509637 FNDC1Q4ZHG4 1894 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-202ENST00000509637 IGLV3-22A0A075B6J6 115 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 SMIM35A0A1B0GVV1 85 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 CPA1P15085 419 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 VN1R2Q8NFZ6 395 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 P2RX5Q93086 422 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 PLVAPQ9BX97 442 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 ANO2Q9NQ90 1003 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 MUTYHQ9UIF7 546 aa18.18■□□□□ 0.5
RAB40C-202ENST00000509637 SMCO2A6NFE2 343 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 ALADP13716 330 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 SREBF1P36956 1147 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 NAPAP54920 295 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 FAM102BQ5T8I3 360 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 IER5Q5VY09 327 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 HFE2Q6ZVN8 426 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 ALYREFQ86V81 257 aaKnown RBP18.17■□□□□ 0.5
RAB40C-202ENST00000509637 POF1BQ8WVV4 589 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 NEK1Q96PY6 1258 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 PPP1R16BQ96T49 567 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 RNF19AQ9NV58 838 aa18.17■□□□□ 0.5
RAB40C-202ENST00000509637 EYA4O95677 639 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 SCG2P13521 617 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-202ENST00000509637 ADD1P35611 737 aaKnown RBP18.16■□□□□ 0.5
RAB40C-202ENST00000509637 KRT76Q01546 638 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 JAKMIP3Q5VZ66 844 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 RBM23Q86U06 439 aaKnown RBP18.16■□□□□ 0.5
RAB40C-202ENST00000509637 RNF135Q8IUD6 432 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 AZI2Q9H6S1 392 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 BARHL2Q9NY43 387 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 CD207Q9UJ71 328 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 RWDD3Q9Y3V2 267 aa18.16■□□□□ 0.5
RAB40C-202ENST00000509637 TRIOO75962 3097 aa18.15■□□□□ 0.5
RAB40C-202ENST00000509637 C9IYK1 514 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms