RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 APBB2Q92870 758 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 IL17RAQ96F46 866 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 IFIH1Q9BYX4 1025 aaKnown RBP20.36■□□□□ 0.85
TPM3-220ENST00000509601 ZNF302Q9NR11 478 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 INSL6Q9Y581 213 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 MAFBQ9Y5Q3 323 aaPredicted RBP20.36■□□□□ 0.85
TPM3-220ENST00000509601 CDY2AQ9Y6F7 541 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 BACH1O14867 736 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 HBP1O60381 514 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 MRPS6P82932 125 aaKnown RBP20.35■□□□□ 0.85
TPM3-220ENST00000509601 GRB10Q13322 594 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 ZNF746Q6NUN9 644 aaPredicted RBP20.35■□□□□ 0.85
TPM3-220ENST00000509601 MIS18BP1Q6P0N0 1132 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 MTHFD1LQ6UB35 978 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 ATP8B4Q8TF62 1192 aa20.35■□□□□ 0.85
TPM3-220ENST00000509601 FAM49AQ9H0Q0 323 aaPredicted RBP20.35■□□□□ 0.85
TPM3-220ENST00000509601 ZBTB42B2RXF5 422 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 ENPP3O14638 875 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 MSH4O15457 936 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 PFKFB2O60825 505 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 DTNBO60941 627 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 KLRC1P26715 233 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 FAM160B1Q5W0V3 765 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 SP7Q8TDD2 431 aaPredicted RBP20.34■□□□□ 0.85
TPM3-220ENST00000509601 TBCKQ8TEA7 893 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 TGS1Q96RS0 853 aaKnown RBP20.34■□□□□ 0.85
TPM3-220ENST00000509601 AGO3Q9H9G7 860 aaKnown RBP20.34■□□□□ 0.85
TPM3-220ENST00000509601 SUGCTQ9HAC7 445 aa20.34■□□□□ 0.85
TPM3-220ENST00000509601 SMIM35A0A1B0GVV1 85 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 UPP2O95045 317 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 SEC24BO95487 1268 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 TMEM62Q0P6H9 643 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 IER5Q5VY09 327 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 PDXDC2PQ6P474 469 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.85
TPM3-220ENST00000509601 RTN4RL1Q86UN2 441 aaPredicted RBP20.33■□□□□ 0.85
TPM3-220ENST00000509601 BLIDQ8IZY5 108 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 NME8Q8N427 588 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 DAGLBQ8NCG7 672 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 SLKQ9H2G2 1235 aaPredicted RBP20.33■□□□□ 0.85
TPM3-220ENST00000509601 PCDHA10Q9Y5I2 948 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 SQORQ9Y6N5 450 aa20.33■□□□□ 0.85
TPM3-220ENST00000509601 XIRP2A4UGR9 3374 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 TTC28Q96AY4 2481 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 CYP3A7-CYP3A51PA0A087WV96 503 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 CTDNEP1O95476 244 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 RPLP2P05387 115 aaKnown RBP20.32■□□□□ 0.84
TPM3-220ENST00000509601 CYP3A7P24462 503 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 AK2P54819 239 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 KRT76Q01546 638 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 ZNF484Q5JVG2 852 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 SMAP1Q8IYB5 467 aaPredicted RBP20.32■□□□□ 0.84
TPM3-220ENST00000509601 KIAA0319LQ8IZA0 1049 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 FAM177A1Q8N128 213 aaPredicted RBP20.32■□□□□ 0.84
TPM3-220ENST00000509601 SLC5A5Q92911 643 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 GJA10Q969M2 543 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 CELF4Q9BZC1 486 aaKnown RBP20.32■□□□□ 0.84
TPM3-220ENST00000509601 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 KCNJ14Q9UNX9 436 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 SIP14410 1827 aa20.32■□□□□ 0.84
TPM3-220ENST00000509601 GTPBP6O43824 516 aaPredicted RBP20.31■□□□□ 0.84
TPM3-220ENST00000509601 PSAPP07602 524 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 CD52P31358 61 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 Q4G0T1 1027 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 GALNT17Q6IS24 598 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 TSHZ1Q6ZSZ6 1077 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 MICALL1Q8N3F8 863 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 ATXN2LQ8WWM7 1075 aaKnown RBP20.31■□□□□ 0.84
TPM3-220ENST00000509601 MBOAT7Q96N66 472 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 RIT2Q99578 217 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 C17orf80Q9BSJ5 609 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 GABBR1Q9UBS5 961 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 TRPV2Q9Y5S1 764 aa20.31■□□□□ 0.84
TPM3-220ENST00000509601 KDM3AQ9Y4C1 1321 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 BBXQ8WY36 941 aaPredicted RBP20.3■□□□□ 0.84
TPM3-220ENST00000509601 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 CDHR5Q9HBB8 845 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 DISC1Q9NRI5 854 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 GJB4Q9NTQ9 266 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 LMCD1Q9NZU5 365 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 EVPLQ92817 2033 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 COL1A2P08123 1366 aa20.3■□□□□ 0.84
TPM3-220ENST00000509601 TTC3P53804 2025 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 MYH9P35579 1960 aaKnown RBP20.29■□□□□ 0.84
TPM3-220ENST00000509601 ZNF862O60290 1169 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 PSMD10O75832 226 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 TDP2O95551 362 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 CENPBP07199 599 aaPredicted RBP20.29■□□□□ 0.84
TPM3-220ENST00000509601 FDPSP14324 419 aaKnown RBP20.29■□□□□ 0.84
TPM3-220ENST00000509601 TJAP1Q5JTD0 557 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 B3GNT9Q6UX72 402 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 CRIPAKQ8N1N5 446 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 GDPD5Q8WTR4 605 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 LINC01599Q8WXQ3 324 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 UNC45AQ9H3U1 944 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 THEGQ9P2T0 379 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 PADI3Q9ULW8 664 aa20.29■□□□□ 0.84
TPM3-220ENST00000509601 STK36Q9NRP7 1315 aa20.28■□□□□ 0.84
TPM3-220ENST00000509601 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms