RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 EPHB4P54760 987 aa22.12■■□□□ 1.13
FGFR4-211ENST00000509511 UGCGQ16739 394 aa22.12■■□□□ 1.13
FGFR4-211ENST00000509511 TRIM71Q2Q1W2 868 aaKnown RBP22.12■■□□□ 1.13
FGFR4-211ENST00000509511 HABP4Q5JVS0 413 aaKnown RBP22.12■■□□□ 1.13
FGFR4-211ENST00000509511 NCAPH2Q6IBW4 605 aa22.12■■□□□ 1.13
FGFR4-211ENST00000509511 PCDHA12Q9UN75 941 aa22.12■■□□□ 1.13
FGFR4-211ENST00000509511 MYH9P35579 1960 aaKnown RBP22.12■■□□□ 1.13
FGFR4-211ENST00000509511 SPIRE1Q08AE8 756 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 RILPL1Q5EBL4 403 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 ZNF484Q5JVG2 852 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 RSPH3Q86UC2 560 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 RPUSD2Q8IZ73 545 aaKnown RBP22.11■■□□□ 1.13
FGFR4-211ENST00000509511 TRAPPC12Q8WVT3 735 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 RNPC3Q96LT9 517 aaKnown RBP22.11■■□□□ 1.13
FGFR4-211ENST00000509511 MTMR9Q96QG7 549 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 TTC12Q9H892 705 aaPredicted RBP22.11■■□□□ 1.13
FGFR4-211ENST00000509511 TRIOBPQ9H2D6 2365 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 KAT6AQ92794 2004 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 LAMA3Q16787 3333 aa22.11■■□□□ 1.13
FGFR4-211ENST00000509511 EML1O00423 815 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 DKC1O60832 514 aaKnown RBP eCLIP22.1■■□□□ 1.139e-19■■■■■ 55.2
FGFR4-211ENST00000509511 ATP4AP20648 1035 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 TXKP42681 527 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 ZNF174Q15697 407 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 C9orf50Q5SZB4 431 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 MARCH8Q5T0T0 291 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 ZNF618Q5T7W0 954 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 RUFY4Q6ZNE9 571 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 TRMT1LQ7Z2T5 733 aaKnown RBP22.1■■□□□ 1.13
FGFR4-211ENST00000509511 BANK1Q8NDB2 785 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 MTIF3Q9H2K0 278 aaKnown RBP22.1■■□□□ 1.13
FGFR4-211ENST00000509511 TMEM60Q9H2L4 133 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
FGFR4-211ENST00000509511 SEPT9Q9UHD8 586 aaPredicted RBP22.1■■□□□ 1.13
FGFR4-211ENST00000509511 TRIP12Q14669 1992 aaPredicted RBP22.1■■□□□ 1.13
FGFR4-211ENST00000509511 ZNF862O60290 1169 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 CTSHP09668 335 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 ACRP10323 421 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 PSMC5P62195 406 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 NBR1Q14596 966 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 SHHQ15465 462 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 BRAPQ7Z569 592 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 DEFB128Q7Z7B8 93 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.09■■□□□ 1.135e-13■□□□□ 10.1
FGFR4-211ENST00000509511 NRBP2Q9NSY0 501 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 WDR81Q562E7 1941 aa22.09■■□□□ 1.13
FGFR4-211ENST00000509511 RSPH10B2B2RC85 870 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 RSPH10BP0C881 870 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 QARSP47897 775 aaKnown RBP22.08■■□□□ 1.13
FGFR4-211ENST00000509511 EPHA7Q15375 998 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 TMEM266Q2M3C6 531 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 XKR3Q5GH77 459 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 MTHFD1LQ6UB35 978 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 RPAINQ86UA6 219 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 NEK9Q8TD19 979 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 LXNQ9BS40 222 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 FAM49AQ9H0Q0 323 aaPredicted RBP22.08■■□□□ 1.13
FGFR4-211ENST00000509511 PCDHA2Q9Y5H9 948 aa22.08■■□□□ 1.13
FGFR4-211ENST00000509511 ZBTB42B2RXF5 422 aa22.07■■□□□ 1.12
FGFR4-211ENST00000509511 P4HBP07237 508 aaKnown RBP22.07■■□□□ 1.12
FGFR4-211ENST00000509511 TOB1P50616 345 aaPredicted RBP22.07■■□□□ 1.12
FGFR4-211ENST00000509511 TMEM240Q5SV17 173 aa22.07■■□□□ 1.12
FGFR4-211ENST00000509511 TRAF7Q6Q0C0 670 aa22.07■■□□□ 1.12
FGFR4-211ENST00000509511 FTOQ9C0B1 505 aaKnown RBP eCLIP22.07■■□□□ 1.12
FGFR4-211ENST00000509511 PCDHB6Q9Y5E3 794 aa22.07■■□□□ 1.12
FGFR4-211ENST00000509511 SCN5AQ14524 2016 aa22.07■■□□□ 1.12
FGFR4-211ENST00000509511 SMIM35A0A1B0GVV1 85 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 POTEMA6NI47 508 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 M0QZ92 97 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 LAD1O00515 517 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 C22orf31O95567 290 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 FGBP02675 491 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 ACTN1P12814 892 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 SYT1P21579 422 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 ZNF365Q70YC5 407 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 C16orf59Q7L2K0 433 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 DNAJB3Q8WWF6 145 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 ZBTB10Q96DT7 871 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 KLRC1P26715 233 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 CYP4A11Q02928 519 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 LRIT3Q3SXY7 679 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 FERMT3Q86UX7 667 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 ZSWIM4Q9H7M6 989 aa22.06■■□□□ 1.12
FGFR4-211ENST00000509511 LAMA2P24043 3122 aaKnown RBP22.05■■□□□ 1.12
FGFR4-211ENST00000509511 MAGEB2O15479 319 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 NBNO60934 754 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 CXCL10P02778 98 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 MRPS6P82932 125 aaKnown RBP22.05■■□□□ 1.12
FGFR4-211ENST00000509511 TBC1D8BQ0IIM8 1120 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 PTGDRQ13258 359 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 MBTPS1Q14703 1052 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 ERMNQ8TAM6 284 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 HERVK_113Q902F9 699 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 EIF2AK1Q9BQI3 630 aaKnown RBP22.05■■□□□ 1.12
FGFR4-211ENST00000509511 RAB34Q9BZG1 259 aa22.05■■□□□ 1.12
FGFR4-211ENST00000509511 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.05■■□□□ 1.12
FGFR4-211ENST00000509511 STX6O43752 255 aa22.04■■□□□ 1.12
FGFR4-211ENST00000509511 TECP42680 631 aa22.04■■□□□ 1.12
FGFR4-211ENST00000509511 MTERF2Q49AM1 385 aa22.04■■□□□ 1.12
FGFR4-211ENST00000509511 FAM26DQ5JW98 314 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms