RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 FAM86B1E9PN63 330 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
KDM3B-206ENST00000509468 BACH1O14867 736 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 HBP1O60381 514 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 FAM86B2P0C5J1 330 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 MTHFD1LQ6UB35 978 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 REXO1Q8N1G1 1221 aaKnown RBP14.36□□□□□ -0.11
KDM3B-206ENST00000509468 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 AGXT2Q9BYV1 514 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 CELF4Q9BZC1 486 aaKnown RBP14.36□□□□□ -0.11
KDM3B-206ENST00000509468 ZNF302Q9NR11 478 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 TRPV2Q9Y5S1 764 aa14.36□□□□□ -0.11
KDM3B-206ENST00000509468 MYH9P35579 1960 aaKnown RBP14.36□□□□□ -0.11
KDM3B-206ENST00000509468 IGLV3-22A0A075B6J6 115 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 DDX39AO00148 427 aaKnown RBP14.35□□□□□ -0.11
KDM3B-206ENST00000509468 KLRC1P26715 233 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 BMPR1AP36894 532 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 EVCP57679 992 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 SETQ01105 290 aaPredicted RBP14.35□□□□□ -0.11
KDM3B-206ENST00000509468 KRT76Q01546 638 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 PKN1Q16512 942 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 ZNF484Q5JVG2 852 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 SWSAP1Q6NVH7 229 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 PDXDC2PQ6P474 469 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 CCDC148Q8NFR7 591 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 ATP8B4Q8TF62 1192 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 RNF26Q9BY78 433 aaPredicted RBP14.35□□□□□ -0.11
KDM3B-206ENST00000509468 RNF216Q9NWF9 866 aaPredicted RBP14.35□□□□□ -0.11
KDM3B-206ENST00000509468 TCEAL9Q9UHQ7 104 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 COL4A6Q14031 1691 aa14.35□□□□□ -0.11
KDM3B-206ENST00000509468 COL1A2P08123 1366 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 NID2Q14112 1375 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 DHX15O43143 795 aaKnown RBP14.34□□□□□ -0.11
KDM3B-206ENST00000509468 CCNE2O96020 404 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 IFNAR1P17181 557 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
KDM3B-206ENST00000509468 CD52P31358 61 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 USP11P51784 963 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 NTRK3Q16288 839 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 ODR4Q5SWX8 454 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 ZNF746Q6NUN9 644 aaPredicted RBP14.34□□□□□ -0.11
KDM3B-206ENST00000509468 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 SMAP1Q8IYB5 467 aaPredicted RBP14.34□□□□□ -0.11
KDM3B-206ENST00000509468 BANK1Q8NDB2 785 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 TRAPPC12Q8WVT3 735 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 PHKBQ93100 1093 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 AGO3Q9H9G7 860 aaKnown RBP14.34□□□□□ -0.11
KDM3B-206ENST00000509468 SH3GLB2Q9NR46 395 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 PADI3Q9ULW8 664 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 PCDHA10Q9Y5I2 948 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 IGSF9BQ9UPX0 1349 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 KDM3AQ9Y4C1 1321 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 XIRP2A4UGR9 3374 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 TTC3P53804 2025 aa14.34□□□□□ -0.11
KDM3B-206ENST00000509468 EVPLQ92817 2033 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 C5orf67F2Z3F1 127 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 NCK2O43639 380 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 DGKIO75912 1065 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 PSAPP07602 524 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 STAG3L1P0CL83 205 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 CIITAP33076 1130 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 PAK2Q13177 524 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 BTG3Q14201 252 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 PUS10Q3MIT2 529 aaKnown RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 CKAP2LQ8IYA6 745 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 TRIM22Q8IYM9 498 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 ZNF689Q96CS4 500 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 SLC26A6Q9BXS9 759 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 LMAN2LQ9H0V9 348 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 UBE2ZQ9H832 354 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 ZSWIM6Q9HCJ5 1215 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 MAFBQ9Y5Q3 323 aaPredicted RBP14.33□□□□□ -0.12
KDM3B-206ENST00000509468 CYP46A1Q9Y6A2 500 aa14.33□□□□□ -0.12
KDM3B-206ENST00000509468 RBAK-RBAKDNI3L0D1 243 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 CTNNB1P35222 781 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 CCT2P78371 535 aaKnown RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 SSRP1Q08945 709 aaKnown RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 LEXMQ3ZCV2 418 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 PRR16Q569H4 304 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 RTN4RL1Q86UN2 441 aaPredicted RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 NPAS4Q8IUM7 802 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 CCDC60Q8IWA6 550 aaPredicted RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 KIAA0319LQ8IZA0 1049 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 ZNF710Q8N1W2 664 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 CLP1Q92989 425 aaKnown RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 ZNF274Q96GC6 653 aaPredicted RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 C1QTNF1Q9BXJ1 281 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 C22orf23Q9BZE7 217 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 NSUN3Q9H649 340 aaKnown RBP14.32□□□□□ -0.12
KDM3B-206ENST00000509468 CEP131Q9UPN4 1083 aa14.32□□□□□ -0.12
KDM3B-206ENST00000509468 SAMM50Q9Y512 469 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms