RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, human

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX2-208	ENST00000509281	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	ALG1	Q9BT22	464 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	BRIP1	Q9BX63	1249 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	KRTAP1-5	Q9BYS1	174 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	HSPBP1	Q9NZL4	362 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	DSE	Q9UL01	958 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	PCDHA9	Q9Y5H5	950 aa		4.87	□□□□□ -1.63
SNX2-208	ENST00000509281	ARVCF	O00192	962 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	AQP7	O14520	342 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	AMY2A	P04746	511 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	PYGM	P11217	842 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	FAH	P16930	419 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	AMY2B	P19961	511 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	GUCY1A3	Q02108	690 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	SF3A1	Q15459	793 aa	Known RBP	4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	FNDC7	Q5VTL7	733 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	KCTD1	Q719H9	257 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	LILRB2	Q8N423	598 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	DTX3	Q8N9I9	347 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	EXTL1	Q92935	676 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	MKL1	Q969V6	931 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	SLC52A2	Q9HAB3	445 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	CROT	Q9UKG9	612 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	CBLC	Q9ULV8	474 aa		4.86	□□□□□ -1.63
SNX2-208	ENST00000509281	WNT9A	O14904	365 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	CRTAM	O95727	393 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	SRGAP2C	P0DJJ0	459 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	COL6A1	P12109	1028 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	IL13	P35225	146 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	EPHA5	P54756	1037 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	GABRE	P78334	506 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	PAK1	Q13153	545 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	LONRF2	Q1L5Z9	754 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	COLEC12	Q5KU26	742 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	PRAMEF18	Q5VWM3	479 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	DPH6	Q7L8W6	267 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	TRIM48	Q8IWZ4	208 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	SLC7A14	Q8TBB6	771 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	SREK1	Q8WXA9	508 aa	Known RBP	4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	YTHDC1	Q96MU7	727 aa	Known RBP	4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	CLIC6	Q96NY7	704 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	TMEM209	Q96SK2	561 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	OSBPL2	Q9H1P3	480 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	NDOR1	Q9UHB4	597 aa		4.85	□□□□□ -1.63
SNX2-208	ENST00000509281	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	FAM90A27P	A6NNH2	459 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	MAN2B1	O00754	1011 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	KCNK3	O14649	394 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	RASGRP1	O95267	797 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	KRT4	P19013	534 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	BMP5	P22003	454 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	ADRA1B	P35368	520 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	CD276	Q5ZPR3	534 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281		Q6ZPA2	131 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	ARHGEF18	Q6ZSZ5	1173 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	OSTM1	Q86WC4	334 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	PTRH1	Q86Y79	214 aa	Known RBP	4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	GSTCD	Q8NEC7	633 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	FBXW5	Q969U6	566 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	SCLY	Q96I15	445 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	IPO9	Q96P70	1041 aa	Known RBP	4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	ADO	Q96SZ5	270 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	SRPK3	Q9UPE1	567 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	PTCH2	Q9Y6C5	1203 aa		4.84	□□□□□ -1.63
SNX2-208	ENST00000509281	ZNF561-AS1	K7EIQ3	104 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	CKM	P06732	381 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	C1S	P09871	688 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	PDE6A	P16499	860 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	JAM2	P57087	298 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	PFKP	Q01813	784 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	BMS1	Q14692	1282 aa	Known RBP	4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	GPR19	Q15760	415 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	SKIDA1	Q1XH10	827 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	VASN	Q6EMK4	673 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	FSTL4	Q6MZW2	842 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	ARHGAP36	Q6ZRI8	547 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	THAP3	Q8WTV1	239 aa	Predicted RBP	4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	CACTIN	Q8WUQ7	758 aa	Known RBP	4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	KANSL2	Q9H9L4	492 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	SMURF1	Q9HCE7	757 aa		4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.83	□□□□□ -1.64
SNX2-208	ENST00000509281	CCDC66	A2RUB6	948 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	ZNF839	A8K0R7	811 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	IL18BP	O95998	194 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	ADH4	P08319	380 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	KRT15	P19012	456 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	RANGAP1	P46060	587 aa	Predicted RBP	4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	GLRB	P48167	497 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	DNM2	P50570	870 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	SEC23A	Q15436	765 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	C2orf27A	Q580R0	203 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	TRIM61	Q5EBN2	209 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	EPHA10	Q5JZY3	1008 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	SOGA3	Q5TF21	947 aa		4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	TRMT10B	Q6PF06	316 aa	Known RBP	4.82	□□□□□ -1.64
SNX2-208	ENST00000509281	C16orf59	Q7L2K0	433 aa		4.82	□□□□□ -1.64

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