RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 CACNB2Q08289 660 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 SYT2Q8N9I0 419 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 PXYLP1Q8TE99 480 aa16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 AFG1LQ8WV93 481 aa16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 TRIM9Q9C026 710 aa16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 MAFBQ9Y5Q3 323 aaPredicted RBP16.54■□□□□ 0.24
SNCAIP-211ENST00000509023 MYMKA6NI61 221 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 HMGCRP04035 888 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 STAT5BP51692 787 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 PRKCEQ02156 737 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 FAM160B1Q5W0V3 765 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 AFAP1L1Q8TED9 768 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 LRRC27Q9C0I9 530 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 AZI2Q9H6S1 392 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 TUBE1Q9UJT0 475 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 HTTP42858 3142 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 TMEM150BA6NC51 233 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 DYNC1LI2O43237 492 aaPredicted RBP16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 SMC2O95347 1197 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 SASS6Q6UVJ0 657 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 SPATA20Q8TB22 786 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 DDX12PQ92771 950 aa16.53■□□□□ 0.24
SNCAIP-211ENST00000509023 EMSYQ7Z589 1322 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 LOXHD1Q8IVV2 1947 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 BIN1O00499 593 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 LGR5O75473 907 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 CYP11B2P19099 503 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 CNGA1P29973 690 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 SARSP49591 514 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 NT5DC1Q5TFE4 455 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 LRSAM1Q6UWE0 723 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 ANO5Q75V66 913 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 DYMQ7RTS9 669 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 GLG1Q92896 1179 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 FUCA2Q9BTY2 467 aa16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 DBR1Q9UK59 544 aaKnown RBP16.52■□□□□ 0.24
SNCAIP-211ENST00000509023 MYH9P35579 1960 aaKnown RBP16.52■□□□□ 0.23
SNCAIP-211ENST00000509023 ARHGEF35A5YM69 484 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 SEPT4O43236 478 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 STBD1O95210 358 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 MMP3P08254 477 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 CCDC192P0DO97 292 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 XRCC6P12956 609 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 ATP4AP20648 1035 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 RARRES1P49788 294 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 ASIC1P78348 528 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 PLA2G4FQ68DD2 849 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 SLAIN1Q8ND83 568 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 GSDMAQ96QA5 445 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 SEPT9Q9UHD8 586 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 Q9Y3F1 56 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 PTCH2Q9Y6C5 1203 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 OATP04181 439 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 RPN1P04843 607 aaKnown RBP16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 LGALS2P05162 132 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 CCND3P30281 292 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 TYRO3Q06418 890 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 ARSHQ5FYA8 562 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 XKR3Q5GH77 459 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 PLPPR4Q7Z2D5 763 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 RUSC1Q9BVN2 902 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 ANKEF1Q9NU02 776 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 MAN1B1Q9UKM7 699 aa16.51■□□□□ 0.23
SNCAIP-211ENST00000509023 NPHP3-ACAD11A0A0J9YXS1 232 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 DUSP11O75319 330 aaKnown RBP16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 MARK3P27448 753 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 GRK4P32298 578 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 NPEPPSP55786 919 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 XKR9Q5GH70 373 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 CNNM4Q6P4Q7 775 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 AP5M1Q9H0R1 490 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 SMARCAD1Q9H4L7 1026 aa16.5■□□□□ 0.23
SNCAIP-211ENST00000509023 KLRC4O43908 158 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 INHAP05111 366 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 DGKDQ16760 1214 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 C1orf186Q6ZWK4 172 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 CEP170P1Q96L14 293 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 A6NJR5 290 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
SNCAIP-211ENST00000509023 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms