RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
PDPN-208ENST00000509009 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 IFNAR1P17181 557 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 GNA11P29992 359 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 SLC26A2P50443 739 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 AKAP17AQ02040 695 aaKnown RBP14.22□□□□□ -0.13
PDPN-208ENST00000509009 MTHFD1LQ6UB35 978 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 TSHZ1Q6ZSZ6 1077 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 TMEM192Q8IY95 271 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 REXO1Q8N1G1 1221 aaKnown RBP14.22□□□□□ -0.13
PDPN-208ENST00000509009 NME8Q8N427 588 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 CCDC12Q8WUD4 166 aaPredicted RBP14.22□□□□□ -0.13
PDPN-208ENST00000509009 ZSWIM6Q9HCJ5 1215 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 SMIM35A0A1B0GVV1 85 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 BACH1O14867 736 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 EDIL3O43854 480 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 HBP1O60381 514 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 ATP4AP20648 1035 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 KLRC1P26715 233 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 CD52P31358 61 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 CIITAP33076 1130 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 CCT2P78371 535 aaKnown RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 TMEM62Q0P6H9 643 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 GPM6BQ13491 265 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 FAM160B1Q5W0V3 765 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 RUFY3Q7L099 469 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 MRPL38Q96DV4 380 aaKnown RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 ZNF577Q9BSK1 485 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 SLC26A6Q9BXS9 759 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 NCOA5Q9HCD5 579 aaKnown RBP14.21□□□□□ -0.13
PDPN-208ENST00000509009 TBC1D22BQ9NU19 505 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 TRPV2Q9Y5S1 764 aa14.21□□□□□ -0.13
PDPN-208ENST00000509009 TCF20Q9UGU0 1960 aaKnown RBP14.2□□□□□ -0.14
PDPN-208ENST00000509009 BMPR1AP36894 532 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
PDPN-208ENST00000509009 ZNF484Q5JVG2 852 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 MIS18BP1Q6P0N0 1132 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 CCDC60Q8IWA6 550 aaPredicted RBP14.2□□□□□ -0.14
PDPN-208ENST00000509009 KIAA0319LQ8IZA0 1049 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 CRIPAKQ8N1N5 446 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 FIBCD1Q8N539 461 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 RASGRP4Q8TDF6 673 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 ATP8B4Q8TF62 1192 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 ZNF689Q96CS4 500 aaPredicted RBP14.2□□□□□ -0.14
PDPN-208ENST00000509009 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 PADI3Q9ULW8 664 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 MYO7AQ13402 2215 aa14.2□□□□□ -0.14
PDPN-208ENST00000509009 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 ZBTB42B2RXF5 422 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 M0QZ92 97 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 LINC00271P0C7V0 271 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 KRT76Q01546 638 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 PTPROQ16827 1216 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 PRR16Q569H4 304 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 ZNF746Q6NUN9 644 aaPredicted RBP14.19□□□□□ -0.14
PDPN-208ENST00000509009 BICD2Q8TD16 824 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 LINC01599Q8WXQ3 324 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 FTHL17Q9BXU8 183 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 CDHR5Q9HBB8 845 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
PDPN-208ENST00000509009 VPS54Q9P1Q0 977 aa14.19□□□□□ -0.14
PDPN-208ENST00000509009 MAFBQ9Y5Q3 323 aaPredicted RBP14.19□□□□□ -0.14
PDPN-208ENST00000509009 IGSF9BQ9UPX0 1349 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 C5orf67F2Z3F1 127 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 DGKIO75912 1065 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 RB1P06400 928 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 USP11P51784 963 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
PDPN-208ENST00000509009 CLP1Q92989 425 aaKnown RBP14.18□□□□□ -0.14
PDPN-208ENST00000509009 LENG9Q96B70 501 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 ZNF274Q96GC6 653 aaPredicted RBP14.18□□□□□ -0.14
PDPN-208ENST00000509009 LARP6Q9BRS8 491 aaKnown RBP14.18□□□□□ -0.14
PDPN-208ENST00000509009 UBE2ZQ9H832 354 aaPredicted RBP14.18□□□□□ -0.14
PDPN-208ENST00000509009 SH3GLB2Q9NR46 395 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 PCDHA10Q9Y5I2 948 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 CYP46A1Q9Y6A2 500 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 TTC3P53804 2025 aa14.18□□□□□ -0.14
PDPN-208ENST00000509009 PSAPP07602 524 aa14.17□□□□□ -0.14
PDPN-208ENST00000509009 SSRP1Q08945 709 aaKnown RBP14.17□□□□□ -0.14
PDPN-208ENST00000509009 BTG3Q14201 252 aaPredicted RBP14.17□□□□□ -0.14
PDPN-208ENST00000509009 SMAP1Q8IYB5 467 aaPredicted RBP14.17□□□□□ -0.14
PDPN-208ENST00000509009 BANK1Q8NDB2 785 aa14.17□□□□□ -0.14
PDPN-208ENST00000509009 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
PDPN-208ENST00000509009 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
PDPN-208ENST00000509009 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
PDPN-208ENST00000509009 COL1A2P08123 1366 aa14.17□□□□□ -0.14
PDPN-208ENST00000509009 SIP14410 1827 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 GRM6O15303 877 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 MSH4O15457 936 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 CTNNB1P35222 781 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 NLRP5P59047 1200 aa14.16□□□□□ -0.14
PDPN-208ENST00000509009 NFX1Q12986 1120 aaKnown RBP14.16□□□□□ -0.14
PDPN-208ENST00000509009 PAK2Q13177 524 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms