RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SPIRE1Q08AE8 756 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 CLIP3Q96DZ5 547 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 KCNJ15Q99712 375 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 CARD11Q9BXL7 1154 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 TLR9Q9NR96 1032 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
DEPDC1B-204ENST00000509006 PRODHO43272 600 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 SOD2P04179 222 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 PABPC1P11940 636 aaKnown RBP3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 COL10A1Q03692 680 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 TOP3AQ13472 1001 aaPredicted RBP3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 Q6ZPA2 131 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 IFNL3Q8IZI9 196 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 GMLQ99445 158 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 C12orf65Q9H3J6 166 aaKnown RBP3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 IPPKQ9H8X2 491 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 SLC2A4RGQ9NR83 387 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 REXO2Q9Y3B8 237 aaKnown RBP3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 NR2E1Q9Y466 385 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 NUB1Q9Y5A7 615 aa3.69□□□□□ -1.82
DEPDC1B-204ENST00000509006 ESYT3A0FGR9 886 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 BLACEA4D250 179 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 IQCA1LA6NCM1 817 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 FAM47E-STBD1D6RA91 191 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 WNT9AO14904 365 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 RAMP2O60895 175 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 POLD1P28340 1107 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 HIBADHP31937 336 aaKnown RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 MSX2P35548 267 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 ARID5AQ03989 594 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 DBPQ10586 325 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 FOXL1Q12952 345 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 GNL2Q13823 731 aaKnown RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 TBR1Q16650 682 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 LRCH2Q5VUJ6 765 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 YOD1Q5VVQ6 348 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 NSMFQ6X4W1 530 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 ANKS3Q6ZW76 656 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 ST13P5Q8NFI4 369 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 TTPALQ9BTX7 342 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 CD244Q9BZW8 370 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 CEP72Q9P209 647 aa3.68□□□□□ -1.82
DEPDC1B-204ENST00000509006 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 FAM90A27PA6NNH2 459 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 E9PSI1 815 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 CUTAO60888 179 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 TCF3P15923 654 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 BMP5P22003 454 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 ETV4P43268 484 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 ZMAT1Q5H9K5 638 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 CFHR4Q92496 578 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 KIAA1683Q9H0B3 1180 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 ZNF703Q9H7S9 590 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 SLC39A2Q9NP94 309 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 HECAQ9UBI9 543 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 SRPK3Q9UPE1 567 aa3.67□□□□□ -1.82
DEPDC1B-204ENST00000509006 TRAV20A0A0B4J274 112 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 AMY2AP04746 511 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 PTPN1P18031 435 aaKnown RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 AMY2BP19961 511 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 DNAJA1P31689 397 aaKnown RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 RPS19P39019 145 aaKnown RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 ATXN1P54253 815 aaKnown RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 FSTL1Q12841 308 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 IFRD2Q12894 506 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 CSRP2Q16527 193 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 SLC43A3Q8NBI5 491 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 ZNF669Q96BR6 464 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 ZDHHC5Q9C0B5 715 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 TRAF6Q9Y4K3 522 aa3.66□□□□□ -1.82
DEPDC1B-204ENST00000509006 MAN2B1O00754 1011 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 ARHGAP6O43182 974 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 ADCY3O60266 1144 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 C6orf222P0C671 652 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 PDE6AP16499 860 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 GJA4P35212 333 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 RBM25P49756 843 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 IL13RA1P78552 427 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 NFYCQ13952 458 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 RAB33AQ14088 237 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 STILQ15468 1287 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 BTBD8Q5XKL5 378 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 RPUSD2Q8IZ73 545 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 LRRC47Q8N1G4 583 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 PRRX2Q99811 253 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 ALG1Q9BT22 464 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 PLA2G3Q9NZ20 509 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 BTBD7Q9P203 1132 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 PUF60Q9UHX1 559 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 MSRB2Q9Y3D2 182 aa3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 R3HCC1Q9Y3T6 440 aaKnown RBP3.65□□□□□ -1.83
DEPDC1B-204ENST00000509006 FOXN1O15353 648 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 MPIG6BO95866 241 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 C4BPAP04003 597 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 AOAHP28039 575 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 PAK1Q13153 545 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 EIF4HQ15056 248 aaKnown RBP3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 GPR19Q15760 415 aa3.64□□□□□ -1.83
DEPDC1B-204ENST00000509006 CCDC142Q17RM4 750 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms