RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 RSPH3Q86UC2 560 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 TRIM50Q86XT4 487 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 CCDC60Q8IWA6 550 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 NEK9Q8TD19 979 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 HERVK_113Q902F9 699 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 DHX38Q92620 1227 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 UNC45AQ9H3U1 944 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 SETD4Q9NVD3 440 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 NOL7Q9UMY1 257 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
POLR2J3-213ENST00000508848 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 SCN5AQ14524 2016 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 BACH1O14867 736 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 SORBS3O60504 671 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 NEMFO60524 1076 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 EFCAB14O75071 495 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 LYPLA2O95372 231 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 FGBP02675 491 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 CSF2RAP15509 400 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 PRPHP41219 470 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 PSMC5P62195 406 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 CDC42EP1Q00587 391 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 SP4Q02446 784 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 TARBP2Q15633 366 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 CALCRLQ16602 461 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 TMEM240Q5SV17 173 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 TRAF7Q6Q0C0 670 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 LRRC8DQ7L1W4 858 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 BRAPQ7Z569 592 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 KCTD17Q8N5Z5 321 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 USP38Q8NB14 1042 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 VWCEQ96DN2 955 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 HSD17B14Q9BPX1 270 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 MTIF3Q9H2K0 278 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 PKD2L1Q9P0L9 805 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 TUBE1Q9UJT0 475 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 SAMM50Q9Y512 469 aa11.93□□□□□ -0.5
POLR2J3-213ENST00000508848 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 ZBTB42B2RXF5 422 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 H3BQV1 296 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 ZNF862O60290 1169 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 BAIAP3O94812 1187 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 STBD1O95210 358 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 QARSP47897 775 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 TOB1P50616 345 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 GNL2Q13823 731 aaKnown RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 IER5Q5VY09 327 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 FAM109BQ6ICB4 259 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 C4orf32Q8N8J7 132 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 PHOSPHO2Q8TCD6 241 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 JPH2Q9BR39 696 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 MORC2Q9Y6X9 1032 aaPredicted RBP11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 LOXHD1Q8IVV2 1947 aa11.92□□□□□ -0.5
POLR2J3-213ENST00000508848 ABHD14A-ACY1A0A1B0GW23 586 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 RSPH10B2B2RC85 870 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 DDX39AO00148 427 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 MARCH6O60337 910 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 DTNBO60941 627 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 BMP15O95972 392 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 RSPH10BP0C881 870 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 ACTN1P12814 892 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 KLRC1P26715 233 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 EPHB4P54760 987 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 SMAD3P84022 425 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 ZNF200P98182 395 aaPredicted RBP11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 GPNMBQ14956 572 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 SHHQ15465 462 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 ZNF618Q5T7W0 954 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 ARL6IP4Q66PJ3 421 aaKnown RBP11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 PPP1R12CQ9BZL4 782 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 ZSWIM4Q9H7M6 989 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
POLR2J3-213ENST00000508848 UMODL1Q5DID0 1318 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 IGKV6-21A0A0C4DH24 114 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 KIF28PB7ZC32 967 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 EML1O00423 815 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 SLC26A4O43511 780 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 GAS2O43903 313 aaKnown RBP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 SLITRK3O94933 977 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 OATP04181 439 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 CCL23P55773 120 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 CHMP4BP1P59074 171 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 PLEKHG4Q58EX7 1191 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 TTC38Q5R3I4 469 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 ZNF365Q70YC5 407 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 OTUD6AQ7L8S5 288 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 APBB2Q92870 758 aa11.9□□□□□ -0.5
POLR2J3-213ENST00000508848 CEP89Q96ST8 783 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms