RNA–Protein interactions for RNA: ENST00000508748.5

PGM3-208, Transcript of phosphoglucomutase 3, human

TSL 5

Gene PGM3, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGM3-208	ENST00000508748	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	IPO5	O00410	1097 aa	Known RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	CPLX1	O14810	134 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	LPXN	O60711	386 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	ATG7	O95352	703 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	IFNAR1	P17181	557 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	PDIA3	P30101	505 aa	Known RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	SSRP1	Q08945	709 aa	Known RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	LPIN1	Q14693	890 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	NTRK3	Q16288	839 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	FBXO47	Q5MNV8	452 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	CPLX2	Q6PUV4	134 aa	Known RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	TSHZ1	Q6ZSZ6	1077 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	CKAP2L	Q8IYA6	745 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	SP7	Q8TDD2	431 aa	Predicted RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	ADAMTS19	Q8TE59	1207 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	TRAPPC12	Q8WVT3	735 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	UIMC1	Q96RL1	719 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	C17orf80	Q9BSJ5	609 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	NCOA5	Q9HCD5	579 aa	Known RBP	13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	ZSWIM6	Q9HCJ5	1215 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	TBC1D22B	Q9NU19	505 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	COG5	Q9UP83	839 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	PCDHA2	Q9Y5H9	948 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	TRPV2	Q9Y5S1	764 aa		13.72	□□□□□ -0.21
PGM3-208	ENST00000508748	IGLV3-22	A0A075B6J6	115 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	TNFRSF10A	O00220	468 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	HBP1	O60381	514 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	CCNE2	O96020	404 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	EVC	P57679	992 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	NLRP5	P59047	1200 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	TFF2	Q03403	129 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	TMEM62	Q0P6H9	643 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	PRR16	Q569H4	304 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	PDXDC2P	Q6P474	469 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	ABHD15	Q6UXT9	468 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	RASGRP4	Q8TDF6	673 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	HLA-C	Q95604	372 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	ZBTB10	Q96DT7	871 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	SH3GLB2	Q9NR46	395 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	VPS54	Q9P1Q0	977 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	SAMM50	Q9Y512	469 aa		13.71	□□□□□ -0.21
PGM3-208	ENST00000508748	COL1A2	P08123	1366 aa		13.71	□□□□□ -0.22
PGM3-208	ENST00000508748	IGKV6D-21	A0A0A0MT36	114 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	SMIM35	A0A1B0GVV1	85 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	PSAP	P07602	524 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	CD52	P31358	61 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	KRT76	Q01546	638 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	TOB2	Q14106	344 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	PTPRO	Q16827	1216 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	EPC2	Q52LR7	807 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	SWSAP1	Q6NVH7	229 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	MTHFD1L	Q6UB35	978 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	NME8	Q8N427	588 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	FIBCD1	Q8N539	461 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	ATP8B4	Q8TF62	1192 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	CRYGN	Q8WXF5	182 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	IL17RA	Q96F46	866 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	ZNF274	Q96GC6	653 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	UHRF1	Q96T88	793 aa	Predicted RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	FTHL17	Q9BXU8	183 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	UPF3B	Q9BZI7	483 aa	Known RBP	13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	TM6SF1	Q9BZW5	370 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	SQOR	Q9Y6N5	450 aa		13.7	□□□□□ -0.22
PGM3-208	ENST00000508748	BDP1	A6H8Y1	2624 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	ENPP3	O14638	875 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	ADAMTS3	O15072	1205 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	DHX15	O43143	795 aa	Known RBP	13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	DEXI	O95424	95 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	KLRC1	P26715	233 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	PAK2	Q13177	524 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	STK3	Q13188	491 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	GPM6B	Q13491	265 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	ZNF484	Q5JVG2	852 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	TMEM192	Q8IY95	271 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	CELF4	Q9BZC1	486 aa	Known RBP	13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	C22orf23	Q9BZE7	217 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	PDRG1	Q9NUG6	133 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	GINS2	Q9Y248	185 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	RWDD3	Q9Y3V2	267 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	PCDHA10	Q9Y5I2	948 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	PLXNA4	Q9HCM2	1894 aa		13.69	□□□□□ -0.22
PGM3-208	ENST00000508748	ADGRA3	Q8IWK6	1321 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	CIITA	P33076	1130 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	CTNNB1	P35222	781 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	USP11	P51784	963 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	KCNQ1	P51787	676 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	BBX	Q8WY36	941 aa	Predicted RBP	13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	LARP6	Q9BRS8	491 aa	Known RBP	13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	AGO3	Q9H9G7	860 aa	Known RBP	13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	PPP4R2	Q9NY27	417 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	PCDHA4	Q9UN74	947 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	CEP131	Q9UPN4	1083 aa		13.68	□□□□□ -0.22
PGM3-208	ENST00000508748	IGSF9B	Q9UPX0	1349 aa		13.67	□□□□□ -0.22
PGM3-208	ENST00000508748	KDM3A	Q9Y4C1	1321 aa		13.67	□□□□□ -0.22
PGM3-208	ENST00000508748	WDR64	B1ANS9	1081 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms