RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 POLR2AP24928 1970 aaKnown RBP12.75□□□□□ -0.37
PRPF40B-203ENST00000508736 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 RASSF10A6NK89 507 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 EYA4O95677 639 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ABL1P00519 1130 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 MCM3P25205 808 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 PLA2G4AP47712 749 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 GPS2Q13227 327 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 CCDC40Q4G0X9 1142 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 NEK11Q8NG66 645 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 NEK9Q8TD19 979 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 NUCKS1Q9H1E3 243 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 EPC1Q9H2F5 836 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ANKZF1Q9H8Y5 726 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 COL4A3BPQ9Y5P4 624 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 PARP14Q460N5 1801 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 VWA5AO00534 786 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 NFIBO00712 420 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 KRT18P05783 430 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ZCWPW2Q504Y3 356 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ARSHQ5FYA8 562 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 PAPD7Q5XG87 772 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 PCNX4Q63HM2 1172 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 IQCEQ6IPM2 695 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 PPP4R3CPQ6ZMV5 832 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 RAVER2Q9HCJ3 691 aaKnown RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 TRIM10Q9UDY6 481 aa12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 CTDP1Q9Y5B0 961 aaPredicted RBP12.74□□□□□ -0.37
PRPF40B-203ENST00000508736 MYPNQ86TC9 1320 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 EML1O00423 815 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 TRAF5O00463 557 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 KIF3CO14782 793 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 GAS7O60861 476 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 ALAS1P13196 640 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 EPHA7Q15375 998 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 CACNA2D4Q7Z3S7 1137 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 TRIM58Q8NG06 486 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 ZKSCAN4Q969J2 545 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 TEKT3Q9BXF9 490 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 FAM207AQ9NSI2 230 aaPredicted RBP12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 COL20A1Q9P218 1284 aa12.73□□□□□ -0.37
PRPF40B-203ENST00000508736 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 EIF3JO75822 258 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 SLITRK3O94933 977 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 PSMC6P62333 389 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 GIT2Q14161 759 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 LRRC41Q15345 812 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 CHADLQ6NUI6 762 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 XRRA1Q6P2D8 792 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 HDXQ7Z353 690 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 REPS2Q8NFH8 660 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 IFIH1Q9BYX4 1025 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 KCND2Q9NZV8 630 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 UBIAD1Q9Y5Z9 338 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 ZHX2Q9Y6X8 837 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 AKR1B10O60218 316 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 TACC1O75410 805 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 LCA5LO95447 670 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 ARP10275 920 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 ITGB5P18084 799 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 DSG3P32926 999 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 KIF11P52732 1056 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 MARSP56192 900 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 PABPC4Q13310 644 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 DGKZQ13574 1117 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 PRKG1Q13976 671 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 RBM46Q8TBY0 533 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 ALS2CR12Q96Q35 445 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 UIMC1Q96RL1 719 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
PRPF40B-203ENST00000508736 RLFQ13129 1914 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 SASH3O75995 380 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 ATP1A1P05023 1023 aaKnown RBP12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 RHOXF2BP0C7M4 288 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 GAP43P17677 238 aa12.71□□□□□ -0.37
PRPF40B-203ENST00000508736 RPS6P62753 249 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms