RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 STAT5BP51692 787 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 NTRK3Q16288 839 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 EPC2Q52LR7 807 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 POTEBQ6S5H4 581 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 TSHZ1Q6ZSZ6 1077 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 PLA2G4DQ86XP0 818 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 CCDC60Q8IWA6 550 aaPredicted RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 REXO1Q8N1G1 1221 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 LINC01599Q8WXQ3 324 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 PHKBQ93100 1093 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 HLA-CQ95604 372 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 AGO3Q9H9G7 860 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 WDR81Q562E7 1941 aa14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 MYH9P35579 1960 aaKnown RBP14.81□□□□□ -0.04
HMGCS1-205ENST00000508319 PPFIA3O75145 1194 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 SLC26A2P50443 739 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 EVCP57679 992 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 ABHD15Q6UXT9 468 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 CCDC12Q8WUD4 166 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 SAMD11Q96NU1 681 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 RNF26Q9BY78 433 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 C6orf50Q9HD87 102 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 PCDHA2Q9Y5H9 948 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 KIAA1671Q9BY89 1806 aa14.8□□□□□ -0.04
HMGCS1-205ENST00000508319 IPO5O00410 1097 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 LINC00271P0C7V0 271 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 PSMA5P28066 241 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 CD52P31358 61 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 SETQ01105 290 aaPredicted RBP14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 TMEM62Q0P6H9 643 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 MTHFD1LQ6UB35 978 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 ADGRA3Q8IWK6 1321 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 TMEM192Q8IY95 271 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 RASGRP4Q8TDF6 673 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 ATP8B4Q8TF62 1192 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 EVPLQ92817 2033 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 MRPL38Q96DV4 380 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 NCOA5Q9HCD5 579 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 IGSF9BQ9UPX0 1349 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 TRPV2Q9Y5S1 764 aa14.79□□□□□ -0.04
HMGCS1-205ENST00000508319 KDM3AQ9Y4C1 1321 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 SMIM35A0A1B0GVV1 85 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 H3BNC9 293 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 ENPP3O14638 875 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 BACH1O14867 736 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 IFNAR1P17181 557 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 GNA11P29992 359 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 PDIA3P30101 505 aaKnown RBP14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 CCT2P78371 535 aaKnown RBP14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 TOB2Q14106 344 aaPredicted RBP14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 IER5Q5VY09 327 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 FAM160B1Q5W0V3 765 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 MCTP2Q6DN12 878 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 FIBCD1Q8N539 461 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 TNPO1Q92973 898 aaKnown RBP14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 LENG9Q96B70 501 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 IL17RAQ96F46 866 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 UIMC1Q96RL1 719 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 SQORQ9Y6N5 450 aa14.78□□□□□ -0.04
HMGCS1-205ENST00000508319 COL1A2P08123 1366 aa14.77□□□□□ -0.04
HMGCS1-205ENST00000508319 ZBTB42B2RXF5 422 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 M0QZ92 97 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 EPB41L2O43491 1005 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 HBP1O60381 514 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 ATP4AP20648 1035 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 CIITAP33076 1130 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 GPM6BQ13491 265 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 PTPROQ16827 1216 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 CRIPAKQ8N1N5 446 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF689Q96CS4 500 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF577Q9BSK1 485 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 SLC26A6Q9BXS9 759 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 UBE2ZQ9H832 354 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF302Q9NR11 478 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 TBC1D22BQ9NU19 505 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 PADI3Q9ULW8 664 aa14.77□□□□□ -0.05
HMGCS1-205ENST00000508319 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 C5orf67F2Z3F1 127 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 EDIL3O43854 480 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 KLRC1P26715 233 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 CTNNB1P35222 781 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 AKAP17AQ02040 695 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 PAK2Q13177 524 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 PRR16Q569H4 304 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 ZNF746Q6NUN9 644 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 SWSAP1Q6NVH7 229 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 MIS18BP1Q6P0N0 1132 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 PDXDC2PQ6P474 469 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 RTN4RL1Q86UN2 441 aaPredicted RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 BICD2Q8TD16 824 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 CLP1Q92989 425 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 FTHL17Q9BXU8 183 aa14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 CELF4Q9BZC1 486 aaKnown RBP14.76□□□□□ -0.05
HMGCS1-205ENST00000508319 DGKIO75912 1065 aa14.75□□□□□ -0.05
HMGCS1-205ENST00000508319 C22orf31O95567 290 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms