RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 PRKCEQ02156 737 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 PTGDRQ13258 359 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 RSPH3Q86UC2 560 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 UBE2OQ9C0C9 1292 aaKnown RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.85■□□□□ 0.29
RNF4-210ENST00000508235 PCDHB6Q9Y5E3 794 aa16.85■□□□□ 0.29
RNF4-210ENST00000508235 EML1O00423 815 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 ATP4AP20648 1035 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 RFC2P35250 354 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 PRPHP41219 470 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 IGBP1P78318 339 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 HIC1Q14526 733 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 NBR1Q14596 966 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 XKR3Q5GH77 459 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
RNF4-210ENST00000508235 ERMNQ8TAM6 284 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 DHX38Q92620 1227 aaKnown RBP16.84■□□□□ 0.29
RNF4-210ENST00000508235 MTMR6Q9Y217 621 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 STK24Q9Y6E0 443 aa16.84■□□□□ 0.29
RNF4-210ENST00000508235 A0A1W2PPC1 479 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 PFKMP08237 780 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 CKBP12277 381 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 SELPP16109 830 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 TECP42680 631 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 CCL23P55773 120 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 UGCGQ16739 394 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 LRRC8DQ7L1W4 858 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 FERMT3Q86UX7 667 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 BANK1Q8NDB2 785 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 NIFKQ9BYG3 293 aaKnown RBP16.83■□□□□ 0.28
RNF4-210ENST00000508235 WNT8AQ9H1J5 351 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 ZSWIM4Q9H7M6 989 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 PCDHA2Q9Y5H9 948 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 DNAH12Q6ZR08 3092 aa16.83■□□□□ 0.28
RNF4-210ENST00000508235 UMODL1Q5DID0 1318 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 MAGEB2O15479 319 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 ZNF862O60290 1169 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 CSF2RAP15509 400 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 KLRC1P26715 233 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 THPOP40225 353 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
RNF4-210ENST00000508235 ATP2C1P98194 919 aaPredicted RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 RESTQ13127 1097 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 PDIA5Q14554 519 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 TRIM71Q2Q1W2 868 aaKnown RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 MTHFD1LQ6UB35 978 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 DTHD1Q6ZMT9 781 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 RPAINQ86UA6 219 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 C4orf19Q8IY42 314 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 C4orf32Q8N8J7 132 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 EIF2AK1Q9BQI3 630 aaKnown RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 SEPT9Q9UHD8 586 aaPredicted RBP16.82■□□□□ 0.28
RNF4-210ENST00000508235 PPME1Q9Y570 386 aa16.82■□□□□ 0.28
RNF4-210ENST00000508235 SMIM35A0A1B0GVV1 85 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 POTEMA6NI47 508 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 M0QZ92 97 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 HAUS3Q68CZ6 603 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 OTUD6AQ7L8S5 288 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 EXOC8Q8IYI6 725 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 NME8Q8N427 588 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 SPRYD3Q8NCJ5 442 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 LXNQ9BS40 222 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 PRO3102Q9H379 93 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 TUFT1Q9NNX1 390 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 IL23AQ9NPF7 189 aa16.81■□□□□ 0.28
RNF4-210ENST00000508235 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
RNF4-210ENST00000508235 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 DDX11L8A8MPP1 907 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 RSPH10B2B2RC85 870 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 ZBTB42B2RXF5 422 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 LYPLA2O95372 231 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 RSPH10BP0C881 870 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 MUTP22033 750 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 TMOD1P28289 359 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 CYP4A11Q02928 519 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 IER5Q5VY09 327 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 PSRC1Q6PGN9 363 aaPredicted RBP16.8■□□□□ 0.28
RNF4-210ENST00000508235 TPH2Q8IWU9 490 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 TDHQ8IZJ6 230 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 ZNF710Q8N1W2 664 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 TRAPPC12Q8WVT3 735 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 WNT8BQ93098 351 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 SCLYQ96I15 445 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 DYDC2Q96IM9 177 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 HSD17B14Q9BPX1 270 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 JPH2Q9BR39 696 aaPredicted RBP16.8■□□□□ 0.28
RNF4-210ENST00000508235 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
RNF4-210ENST00000508235 RGL1Q9NZL6 768 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 EVPLQ92817 2033 aa16.8■□□□□ 0.28
RNF4-210ENST00000508235 SCN5AQ14524 2016 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms