RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
LIN54-207ENST00000508171 FOSP01100 380 aaPredicted RBP12□□□□□ -0.49
LIN54-207ENST00000508171 UCHL3P15374 230 aa12□□□□□ -0.49
LIN54-207ENST00000508171 PON1P27169 355 aa12□□□□□ -0.49
LIN54-207ENST00000508171 CHRNA5P30532 468 aa12□□□□□ -0.49
LIN54-207ENST00000508171 MMP14P50281 582 aa12□□□□□ -0.49
LIN54-207ENST00000508171 HDLBPQ00341 1268 aaKnown RBP12□□□□□ -0.49
LIN54-207ENST00000508171 CTTNQ14247 550 aaKnown RBP12□□□□□ -0.49
LIN54-207ENST00000508171 ASIC2Q16515 512 aa12□□□□□ -0.49
LIN54-207ENST00000508171 DCAF17Q5H9S7 520 aaPredicted RBP12□□□□□ -0.49
LIN54-207ENST00000508171 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
LIN54-207ENST00000508171 SND1Q7KZF4 910 aaKnown RBP eCLIP12□□□□□ -0.49
LIN54-207ENST00000508171 CSRNP1Q96S65 589 aa12□□□□□ -0.49
LIN54-207ENST00000508171 SERPINA10Q9UK55 444 aa12□□□□□ -0.49
LIN54-207ENST00000508171 SLC26A4O43511 780 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 GCNT3O95395 438 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 CIITAP33076 1130 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 UBXN2AP68543 259 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 FRMD5Q7Z6J6 570 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 GOLPH3Q9H4A6 298 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 ZNF646O15015 1829 aaPredicted RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 ASTN1O14525 1302 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 IGLV3-22A0A075B6J6 115 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 PDXKO00764 312 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 CFBP00751 764 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 AFPP02771 609 aaKnown RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 XRCC5P13010 732 aaKnown RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 FOXR1Q6PIV2 292 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 STIM2Q9P246 746 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
LIN54-207ENST00000508171 RABGAP1Q9Y3P9 1069 aa11.99□□□□□ -0.49
LIN54-207ENST00000508171 ZSCAN5CA6NGD5 496 aaPredicted RBP11.98□□□□□ -0.49
LIN54-207ENST00000508171 CHMP2AO43633 222 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 NR3C1P04150 777 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 GLI1P08151 1106 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 PTPROQ16827 1216 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 CFAP221Q4G0U5 840 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 MUM1L1Q5H9M0 696 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 RINT1Q6NUQ1 792 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 GJB7Q6PEY0 223 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 KSR1Q8IVT5 923 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 TPH2Q8IWU9 490 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 GOLGA5Q8TBA6 731 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 SPAG5Q96R06 1193 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 WDR18Q9BV38 432 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.98□□□□□ -0.49
LIN54-207ENST00000508171 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 PCDHGC5Q9Y5F6 944 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 GRID2IPA4D2P6 1211 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 SLITRK3O94933 977 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 FKBP1AP62942 108 aaKnown RBP11.98□□□□□ -0.49
LIN54-207ENST00000508171 ZC2HC1CQ53FD0 456 aaPredicted RBP11.98□□□□□ -0.49
LIN54-207ENST00000508171 MEI1Q5TIA1 1274 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 C8orf74Q6P047 294 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 SAMD1Q6SPF0 538 aaPredicted RBP11.98□□□□□ -0.49
LIN54-207ENST00000508171 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 HSD17B14Q9BPX1 270 aa11.98□□□□□ -0.49
LIN54-207ENST00000508171 ESYT3A0FGR9 886 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 GOLGA6BA6NDN3 693 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 H0YIN7 160 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 TGFB1I1O43294 461 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 CALUO43852 315 aaPredicted RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 NPM3O75607 178 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 EYA4O95677 639 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 APBA3O96018 575 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 NMT1P30419 496 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 EPHA7Q15375 998 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 MCTP2Q6DN12 878 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 TSEN2Q8NCE0 465 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 SLC35C1Q96A29 364 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 POLR3CQ9BUI4 534 aaPredicted RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 LUC7LQ9NQ29 371 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 PLCB1Q9NQ66 1216 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 TBCAO75347 108 aaKnown RBP11.97□□□□□ -0.49
LIN54-207ENST00000508171 CYP3A4P08684 503 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 AFAP1L1Q8TED9 768 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 DYDC2Q96IM9 177 aa11.97□□□□□ -0.49
LIN54-207ENST00000508171 ATRNL1Q5VV63 1379 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 CLRN2A0PK11 232 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 YDJCA8MPS7 323 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 STAT2P52630 851 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 COG2Q14746 738 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 TRADDQ15628 312 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
LIN54-207ENST00000508171 LRRC31Q6UY01 552 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 MYCT1Q8N699 235 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.96□□□□□ -0.49
LIN54-207ENST00000508171 SIX2Q9NPC8 291 aa11.96□□□□□ -0.49
LIN54-207ENST00000508171 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms