RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.14
DDX41-208ENST00000507955 EPS15P42566 896 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 ASTE1Q2TB18 679 aaPredicted RBP15.95■□□□□ 0.14
DDX41-208ENST00000507955 PAPD7Q5XG87 772 aaKnown RBP15.95■□□□□ 0.14
DDX41-208ENST00000507955 HDXQ7Z353 690 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 IL31RAQ8NI17 732 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 PURBQ96QR8 312 aaKnown RBP15.95■□□□□ 0.14
DDX41-208ENST00000507955 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 ASTN1O14525 1302 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 GAS7O60861 476 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 GJB7Q6PEY0 223 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 EPM2AIP1Q7L775 607 aaPredicted RBP15.95■□□□□ 0.14
DDX41-208ENST00000507955 MYCT1Q8N699 235 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 CEP63Q96MT8 703 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 PSMD1Q99460 953 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 ZNF577Q9BSK1 485 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.95■□□□□ 0.14
DDX41-208ENST00000507955 PACSIN1Q9BY11 444 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 UNC45AQ9H3U1 944 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 ZNRF3Q9ULT6 936 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
DDX41-208ENST00000507955 POTEB2H3BUK9 544 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 NAP1L1P55209 391 aaKnown RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 IRX5P78411 483 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 C2orf54Q08AI8 447 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 RASA3Q14644 834 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 CEP55Q53EZ4 464 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 NIM1KQ8IY84 436 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 TXLNBQ8N3L3 684 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 CHURC1Q8WUH1 139 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 VPS18Q9P253 973 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 ADAMTS1Q9UHI8 967 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 AJAP1Q9UKB5 411 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 LRRIQ3A6PVS8 624 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 TULP1O00294 542 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 TBCAO75347 108 aaKnown RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 EYA4O95677 639 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 MATR3P43243 847 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX41-208ENST00000507955 CASP8Q14790 479 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 PTPROQ16827 1216 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 KCTD19Q17RG1 926 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 TBC1D10BQ4KMP7 808 aaPredicted RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 SFMBT2Q5VUG0 894 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 GSPT2Q8IYD1 628 aaKnown RBP15.94■□□□□ 0.14
DDX41-208ENST00000507955 CAGE1Q8TC20 777 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 WDR11Q9BZH6 1224 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 CEP72Q9P209 647 aa15.94■□□□□ 0.14
DDX41-208ENST00000507955 A0A087X0T9 212 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 TMEM150BA6NC51 233 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 TGFB1I1O43294 461 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 FAM228BP0C875 321 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 CAPN2P17655 700 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 ITGB5P18084 799 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 LMAN1P49257 510 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 GRIPAP1Q4V328 841 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 PRAMEF18Q5VWM3 479 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 POLR3CQ9BUI4 534 aaPredicted RBP15.93■□□□□ 0.14
DDX41-208ENST00000507955 ARMCX3Q9UH62 379 aaPredicted RBP15.93■□□□□ 0.14
DDX41-208ENST00000507955 PGAP2Q9UHJ9 254 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 CCPG1Q9ULG6 757 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 ZNF536O15090 1300 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 NR3C1P04150 777 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 EXOC4Q96A65 974 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 FAN1Q9Y2M0 1017 aa15.93■□□□□ 0.14
DDX41-208ENST00000507955 TULP2O00295 520 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 USO1O60763 962 aaKnown RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 EDRF1Q3B7T1 1238 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 ZNF662Q6ZS27 426 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 C1orf186Q6ZWK4 172 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 SAMD7Q7Z3H4 446 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 SLC5A5Q92911 643 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 PLEKHA4Q9H4M7 779 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 RAVER2Q9HCJ3 691 aaKnown RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 MYOZ2Q9NPC6 264 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 TRAF3IP3Q9Y228 551 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 ERLIN1O75477 346 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 FAM13AO94988 1023 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 MARSP56192 900 aaKnown RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 SLC9C1Q4G0N8 1177 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 RDH13Q8NBN7 331 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 HOOK2Q96ED9 719 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 GANQ9H2C0 597 aa15.92■□□□□ 0.14
DDX41-208ENST00000507955 MRPL11Q9Y3B7 192 aaKnown RBP15.92■□□□□ 0.14
DDX41-208ENST00000507955 LCA5LO95447 670 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 GNA14O95837 355 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 ALAS1P13196 640 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 PRELPP51888 382 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 MUM1L1Q5H9M0 696 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 DPY19L2P1Q6NXN4 242 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 EHBP1Q8NDI1 1231 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 HDAC7Q8WUI4 952 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 MS4A14Q96JA4 679 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 LXNQ9BS40 222 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 GOLPH3Q9H4A6 298 aa15.91■□□□□ 0.14
DDX41-208ENST00000507955 ZMYM2Q9UBW7 1377 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms