RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 ADAM23O75077 832 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 BTDP43251 543 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 HERVK_113P62684 666 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 ERVK-24P63145 666 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 PICALMQ13492 652 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 CAMK2GQ13555 558 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 MVPQ14764 893 aaKnown RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 LRRC26Q2I0M4 334 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 PRSS36Q5K4E3 855 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 SCARA3Q6AZY7 606 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 BNC2Q6ZN30 1099 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 PLEKHH3Q7Z736 793 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 CERS3Q8IU89 383 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 CLEC10AQ8IUN9 316 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 USP6NLQ92738 828 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 PLPPR2Q96GM1 343 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 CDX2Q99626 313 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 NOL10Q9BSC4 688 aaKnown RBP8.23□□□□□ -1.09
NR1I3-224ENST00000507215 USP44Q9H0E7 712 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 SEMA6CQ9H3T2 930 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 ABCF2Q9UG63 623 aa8.23□□□□□ -1.09
NR1I3-224ENST00000507215 PLXNB2O15031 1838 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 ATAD5Q96QE3 1844 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 BAG3O95817 575 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 HOXC6P09630 235 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-224ENST00000507215 RHBDL3P58872 404 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 FAM160A1Q05DH4 1040 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 SEZ6L2Q6UXD5 910 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 ATG9AQ7Z3C6 839 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 GPR142Q7Z601 462 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 FOXP4Q8IVH2 680 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-224ENST00000507215 SENP6Q9GZR1 1112 aaPredicted RBP8.22□□□□□ -1.09
NR1I3-224ENST00000507215 DDX4Q9NQI0 724 aaKnown RBP8.22□□□□□ -1.09
NR1I3-224ENST00000507215 DDX20Q9UHI6 824 aaKnown RBP8.22□□□□□ -1.09
NR1I3-224ENST00000507215 GGT7Q9UJ14 662 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 EYSQ5T1H1 3165 aa8.22□□□□□ -1.09
NR1I3-224ENST00000507215 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-224ENST00000507215 FAM221AA4D161 298 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 SLC15A5A6NIM6 579 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 KBTBD13C9JR72 458 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 GFRA2O00451 464 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 RLBP1P12271 317 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 FOSL2P15408 326 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 FSTP19883 344 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 PHKA1P46020 1223 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 USP14P54578 494 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 LMNB2Q03252 620 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 RASGRF1Q13972 1273 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 TMED8Q6PL24 325 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-224ENST00000507215 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.1
NR1I3-224ENST00000507215 RELL1Q8IUW5 271 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 KLHDC4Q8TBB5 520 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 EDC3Q96F86 508 aaKnown RBP8.21□□□□□ -1.1
NR1I3-224ENST00000507215 MIR1-1HGQ9H1L0 117 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 ATXN3LQ9H3M9 355 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 SLC5A4Q9NY91 659 aa8.21□□□□□ -1.1
NR1I3-224ENST00000507215 FRMPD3Q5JV73 1810 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 STRNO43815 780 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 F13A1P00488 732 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 HLA-DOAP06340 250 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 UBTFL1P0CB47 393 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-224ENST00000507215 ADMP35318 185 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 ZNF76P36508 570 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 MECOMQ03112 1051 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 SNX17Q15036 470 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 NFKBIBQ15653 356 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 WIPI1Q5MNZ9 446 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-224ENST00000507215 FBXL19Q6PCT2 694 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 LBX2Q6XYB7 198 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 RNF214Q8ND24 703 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 GATA6Q92908 595 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 ISL2Q96A47 359 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 C12orf42Q96LP6 360 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 P2RX7Q99572 595 aaKnown RBP8.2□□□□□ -1.1
NR1I3-224ENST00000507215 C1GALT1Q9NS00 363 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 ADAMTS1Q9UHI8 967 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 CDH23Q9H251 3354 aa8.2□□□□□ -1.1
NR1I3-224ENST00000507215 LTBP2Q14767 1821 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 CCND3P30281 292 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-224ENST00000507215 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
NR1I3-224ENST00000507215 RTP1P59025 263 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 GRB14Q14449 540 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 ZNF394Q53GI3 561 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 OLFML2BQ68BL8 750 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 RNF43Q68DV7 783 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 HS2ST1Q7LGA3 356 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 TEX11Q8IYF3 940 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 CRACR2BQ8N4Y2 399 aaPredicted RBP8.19□□□□□ -1.1
NR1I3-224ENST00000507215 FBXO27Q8NI29 283 aa8.19□□□□□ -1.1
NR1I3-224ENST00000507215 ATXN2LQ8WWM7 1075 aaKnown RBP8.19□□□□□ -1.1
NR1I3-224ENST00000507215 NSUN4Q96CB9 384 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms