RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 SLFN12Q8IYM2 578 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 TBCKQ8TEA7 893 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 MYLIPQ8WY64 445 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
SFXN1-206ENST00000507017 GTF3C6Q969F1 213 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 LLPHQ9BRT6 129 aaKnown RBP8.65□□□□□ -1.02
SFXN1-206ENST00000507017 TTYH1Q9H313 450 aaPredicted RBP8.65□□□□□ -1.02
SFXN1-206ENST00000507017 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 LIMCH1Q9UPQ0 1083 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 TRPV2Q9Y5S1 764 aa8.65□□□□□ -1.02
SFXN1-206ENST00000507017 TRIP12Q14669 1992 aaPredicted RBP8.64□□□□□ -1.03
SFXN1-206ENST00000507017 DOCK5Q9H7D0 1870 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 KDM3AQ9Y4C1 1321 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 CYP3A7-CYP3A51PA0A087WV96 503 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 CARNS1A5YM72 827 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 CA3P07451 260 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 CYP3A7P24462 503 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 DNM2P50570 870 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 ZNF200P98182 395 aaPredicted RBP8.64□□□□□ -1.03
SFXN1-206ENST00000507017 SCRN1Q12765 414 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 PAK2Q13177 524 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 PTPROQ16827 1216 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 SWSAP1Q6NVH7 229 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 MIER3Q7Z3K6 550 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 MYOCDQ8IZQ8 938 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 DBF4BQ8NFT6 615 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 RSPH1Q8WYR4 309 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 TGS1Q96RS0 853 aaKnown RBP8.64□□□□□ -1.03
SFXN1-206ENST00000507017 YME1L1Q96TA2 773 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 DISC1Q9NRI5 854 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 DDX25Q9UHL0 483 aaKnown RBP8.64□□□□□ -1.03
SFXN1-206ENST00000507017 TPCN1Q9ULQ1 816 aa8.64□□□□□ -1.03
SFXN1-206ENST00000507017 MAFBQ9Y5Q3 323 aaPredicted RBP8.64□□□□□ -1.03
SFXN1-206ENST00000507017 SCN5AQ14524 2016 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 COL4A6Q14031 1691 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 IGSF9BQ9UPX0 1349 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GRXCR1A8MXD5 290 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GPR182O15218 404 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GAS2O43903 313 aaKnown RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 OATP04181 439 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 IGFBP4P22692 258 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 PBX2P40425 430 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 MCM2P49736 904 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 ORC2Q13416 577 aaPredicted RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GNL2Q13823 731 aaKnown RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GRIN2CQ14957 1233 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 LETM2Q2VYF4 491 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 XKR3Q5GH77 459 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 TRAF7Q6Q0C0 670 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 MTHFD1LQ6UB35 978 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 FAM184AQ8NB25 1140 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 NEK9Q8TD19 979 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 RASGRP4Q8TDF6 673 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 PPP1R13LQ8WUF5 828 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 DNAJB3Q8WWF6 145 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 SLC5A5Q92911 643 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 SCLT1Q96NL6 688 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 CELF4Q9BZC1 486 aaKnown RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 INO80BQ9C086 356 aaPredicted RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 FAM49AQ9H0Q0 323 aaPredicted RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 PRDM12Q9H4Q4 367 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 BCAS3Q9H6U6 928 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 C1orf112Q9NSG2 853 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 GABBR1Q9UBS5 961 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 YBX2Q9Y2T7 364 aaKnown RBP8.63□□□□□ -1.03
SFXN1-206ENST00000507017 CDY2AQ9Y6F7 541 aa8.63□□□□□ -1.03
SFXN1-206ENST00000507017 MYH9P35579 1960 aaKnown RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 MSH4O15457 936 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 DHX15O43143 795 aaKnown RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 HOXA2O43364 376 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 CCNE2O96020 404 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 GHRP10912 638 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 POU3F3P20264 500 aaPredicted RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 KLRC1P26715 233 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 RABGGTBP53611 331 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 PSMC5P62195 406 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 PRKCEQ02156 737 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 TBC1D8BQ0IIM8 1120 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 RABEP1Q15276 862 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 INF2Q27J81 1249 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 FBXO47Q5MNV8 452 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 OTUD6AQ7L8S5 288 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 CCDC60Q8IWA6 550 aaPredicted RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 TOP1MTQ969P6 601 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 PPP2R3CQ969Q6 453 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 CCDC43Q96MW1 224 aaKnown RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 MBOAT7Q96N66 472 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 PCYT2Q99447 389 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 THEGQ9P2T0 379 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 NOL7Q9UMY1 257 aaKnown RBP8.62□□□□□ -1.03
SFXN1-206ENST00000507017 STK24Q9Y6E0 443 aa8.62□□□□□ -1.03
SFXN1-206ENST00000507017 MICAL3Q7RTP6 2002 aa8.61□□□□□ -1.03
SFXN1-206ENST00000507017 FSD2A1L4K1 749 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms