RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 IKBKEQ14164 716 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 TCTN1Q2MV58 587 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 FAM26DQ5JW98 314 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 CDX2Q99626 313 aaPredicted RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 LLPHQ9BRT6 129 aaKnown RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 FAM49AQ9H0Q0 323 aaPredicted RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 SH2B1Q9NRF2 756 aaPredicted RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 DISC1Q9NRI5 854 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 STXBP5LQ9Y2K9 1186 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 YBX2Q9Y2T7 364 aaKnown RBP17.56■□□□□ 0.4
MED28-204ENST00000506409 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
MED28-204ENST00000506409 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 SLC37A4O43826 429 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 CCNT1O60563 726 aaKnown RBP17.55■□□□□ 0.4
MED28-204ENST00000506409 PSMD10O75832 226 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 CHRNA1P02708 482 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 MMP1P03956 469 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 RPLP2P05387 115 aaKnown RBP17.55■□□□□ 0.4
MED28-204ENST00000506409 GCFC2P16383 781 aaKnown RBP17.55■□□□□ 0.4
MED28-204ENST00000506409 JAK3P52333 1124 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 PLEKHG4Q58EX7 1191 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 EARS2Q5JPH6 523 aaKnown RBP17.55■□□□□ 0.4
MED28-204ENST00000506409 KRT40Q6A162 431 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 PPP4R3AQ6IN85 833 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 HERC6Q8IVU3 1022 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 SEPT8Q92599 483 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 NAP1L4Q99733 375 aaKnown RBP17.55■□□□□ 0.4
MED28-204ENST00000506409 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 UNC45AQ9H3U1 944 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 SLC28A3Q9HAS3 691 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 PCDHA2Q9Y5H9 948 aa17.55■□□□□ 0.4
MED28-204ENST00000506409 COL1A2P08123 1366 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 GBF1Q92538 1859 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 IGSF9BQ9UPX0 1349 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 ST18O60284 1047 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 MYOGP15173 224 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 ATP4AP20648 1035 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 MTHFD1LQ6UB35 978 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 TRMT1LQ7Z2T5 733 aaKnown RBP17.54■□□□□ 0.4
MED28-204ENST00000506409 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
MED28-204ENST00000506409 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
MED28-204ENST00000506409 TNFRSF25Q93038 417 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 OSBPL7Q9BZF2 842 aa17.54■□□□□ 0.4
MED28-204ENST00000506409 MYH9P35579 1960 aaKnown RBP17.53■□□□□ 0.4
MED28-204ENST00000506409 SMIM35A0A1B0GVV1 85 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 FAM205CA6NFA0 338 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 KIF28PB7ZC32 967 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 KLRC1P26715 233 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 DEFB103AP81534 67 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
MED28-204ENST00000506409 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
MED28-204ENST00000506409 MGAT3Q09327 533 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 GRIN2CQ14957 1233 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 ZNF484Q5JVG2 852 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 IER5Q5VY09 327 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 PPP2R2DQ66LE6 453 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 MIER3Q7Z3K6 550 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 RDM1Q8NG50 284 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 MYLIPQ8WY64 445 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 FAM167AQ96KS9 214 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 IFIH1Q9BYX4 1025 aaKnown RBP17.53■□□□□ 0.4
MED28-204ENST00000506409 CDY2AQ9Y6F7 541 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
MED28-204ENST00000506409 M0QZ92 97 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 GHRP10912 638 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 SAFBQ15424 915 aaKnown RBP eCLIP17.52■□□□□ 0.4
MED28-204ENST00000506409 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 TMCO2Q7Z6W1 182 aaPredicted RBP17.52■□□□□ 0.4
MED28-204ENST00000506409 APBB2Q92870 758 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 C8orf76Q96K31 380 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 FAM20AQ96MK3 541 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 KCNMB3Q9NPA1 279 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
MED28-204ENST00000506409 COL6A3P12111 3177 aa17.52■□□□□ 0.39
MED28-204ENST00000506409 ZBTB42B2RXF5 422 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 TLL1O43897 1013 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 ZNF862O60290 1169 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 MARCH6O60337 910 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 AMHP03971 560 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 OATP04181 439 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 CA3P07451 260 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 PRKCEQ02156 737 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 LPIN1Q14693 890 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 UGCGQ16739 394 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 FBXO47Q5MNV8 452 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
MED28-204ENST00000506409 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 TBC1D32Q96NH3 1257 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 ZBED2Q9BTP6 218 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
MED28-204ENST00000506409 TBX3O15119 743 aa17.5■□□□□ 0.39
MED28-204ENST00000506409 GJB5O95377 273 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms