RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 ATP8B4Q8TF62 1192 aa12.89□□□□□ -0.35
KDM3B-203ENST00000505756 TNFRSF25Q93038 417 aa12.89□□□□□ -0.35
KDM3B-203ENST00000505756 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
KDM3B-203ENST00000505756 SLC37A4O43826 429 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 HBP1O60381 514 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 CCNT1O60563 726 aaKnown RBP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 PSMD10O75832 226 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 DNAJB2P25686 324 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 MBTPS1Q14703 1052 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 EARS2Q5JPH6 523 aaKnown RBP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 RUFY4Q6ZNE9 571 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 Q7L0L9 218 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 CKAP2LQ8IYA6 745 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 RDM1Q8NG50 284 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 COL1A2P08123 1366 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 TRIP12Q14669 1992 aaPredicted RBP12.88□□□□□ -0.35
KDM3B-203ENST00000505756 IGSF9BQ9UPX0 1349 aa12.88□□□□□ -0.35
KDM3B-203ENST00000505756 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 BTBD18B2RXH4 712 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 TBX3O15119 743 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 CHMP2AO43633 222 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 EFCAB14O75071 495 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 CTSHP09668 335 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 ATP2A2P16615 1042 aaKnown RBP12.87□□□□□ -0.35
KDM3B-203ENST00000505756 ATP4AP20648 1035 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 FOSBP53539 338 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 RAB30Q15771 203 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 ZNF484Q5JVG2 852 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 FAM184AQ8NB25 1140 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 GJA10Q969M2 543 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 FAM167AQ96KS9 214 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 FAM20AQ96MK3 541 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 UNC45AQ9H3U1 944 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 KCNMB3Q9NPA1 279 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
KDM3B-203ENST00000505756 SMIM35A0A1B0GVV1 85 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 ABHD14A-ACY1A0A1B0GW23 586 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 KCNJ6P48051 423 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 IKBKEQ14164 716 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 MTHFD1LQ6UB35 978 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 MIER3Q7Z3K6 550 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 TRAPPC12Q8WVT3 735 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 DNAJB3Q8WWF6 145 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 TIFAQ96CG3 184 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 CEP131Q9UPN4 1083 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
KDM3B-203ENST00000505756 MARCH6O60337 910 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 CHRNA1P02708 482 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 PDCP20941 246 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 KLRC1P26715 233 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 PBX2P40425 430 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 WDR5P61964 334 aaKnown RBP12.85□□□□□ -0.35
KDM3B-203ENST00000505756 GUCY1B3Q02153 619 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 MGAT3Q09327 533 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 PPP2R5CQ13362 524 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 PLEKHG4Q58EX7 1191 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 IER5Q5VY09 327 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 NME8Q8N427 588 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 DBF4BQ8NFT6 615 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 SEPT8Q92599 483 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 APBB2Q92870 758 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 ZBTB10Q96DT7 871 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
KDM3B-203ENST00000505756 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
KDM3B-203ENST00000505756 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 CHMP5Q9NZZ3 219 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 VAV3Q9UKW4 847 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
KDM3B-203ENST00000505756 KAT6AQ92794 2004 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 M0QZ92 97 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 ZNF862O60290 1169 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
KDM3B-203ENST00000505756 OATP04181 439 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 GJB2P29033 226 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 NUCB2P80303 420 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
KDM3B-203ENST00000505756 PRKCEQ02156 737 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 UGCGQ16739 394 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 TCTN1Q2MV58 587 aa12.84□□□□□ -0.35
KDM3B-203ENST00000505756 HERC6Q8IVU3 1022 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms