RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 CRYGNQ8WXF5 182 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 NECAB3Q96P71 396 aaPredicted RBP22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 FAM49AQ9H0Q0 323 aaPredicted RBP22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 TRPV2Q9Y5S1 764 aa22.71■■□□□ 1.23
UBE2D3-220ENST00000505307 FAM86B1E9PN63 330 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 HBP1O60381 514 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 RB1P06400 928 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 FAM86B2P0C5J1 330 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 CPA1P15085 419 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 GPM6BQ13491 265 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 MIS18BP1Q6P0N0 1132 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 ABHD15Q6UXT9 468 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 RNF26Q9BY78 433 aaPredicted RBP22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 TBC1D22BQ9NU19 505 aa22.7■■□□□ 1.22
UBE2D3-220ENST00000505307 KDM3AQ9Y4C1 1321 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 IPO5O00410 1097 aaKnown RBP22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 BACH1O14867 736 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 CCNE2O96020 404 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 PKN1Q16512 942 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 MTHFD1LQ6UB35 978 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 CCDC148Q8NFR7 591 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 ATP8B4Q8TF62 1192 aa22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 UBE2ZQ9H832 354 aaPredicted RBP22.69■■□□□ 1.22
UBE2D3-220ENST00000505307 BDP1A6H8Y1 2624 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 COL1A2P08123 1366 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 IGLV3-22A0A075B6J6 115 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 DHX15O43143 795 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 EVCP57679 992 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 ZNF577Q9BSK1 485 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 CELF4Q9BZC1 486 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 ZNF302Q9NR11 478 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 TCEAL9Q9UHQ7 104 aa22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 TCF20Q9UGU0 1960 aaKnown RBP22.68■■□□□ 1.22
UBE2D3-220ENST00000505307 ADGRA3Q8IWK6 1321 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 IGSF9BQ9UPX0 1349 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 C5orf67F2Z3F1 127 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 DDX39AO00148 427 aaKnown RBP22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 IFNAR1P17181 557 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 CD52P31358 61 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 NTRK3Q16288 839 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 ZNF484Q5JVG2 852 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 ZNF746Q6NUN9 644 aaPredicted RBP22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 PDXDC2PQ6P474 469 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 SMAP1Q8IYB5 467 aaPredicted RBP22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 TRAPPC12Q8WVT3 735 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 C11orf84Q9BUA3 381 aaPredicted RBP22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 LMAN2LQ9H0V9 348 aa22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 AGO3Q9H9G7 860 aaKnown RBP22.67■■□□□ 1.22
UBE2D3-220ENST00000505307 TTC3P53804 2025 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 KLRC1P26715 233 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 CIITAP33076 1130 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 BMPR1AP36894 532 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 KRT76Q01546 638 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 PAK2Q13177 524 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 LEXMQ3ZCV2 418 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 ODR4Q5SWX8 454 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 BANK1Q8NDB2 785 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 CLP1Q92989 425 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 PHKBQ93100 1093 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 ZNF689Q96CS4 500 aaPredicted RBP22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 RC3H2Q9HBD1 1191 aaKnown RBP22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 SH3GLB2Q9NR46 395 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 PADI3Q9ULW8 664 aa22.66■■□□□ 1.22
UBE2D3-220ENST00000505307 BRWD1Q9NSI6 2320 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 DGKIO75912 1065 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 STAG3L1P0CL83 205 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 PDIA3P30101 505 aaKnown RBP22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 CTNNB1P35222 781 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 BTG3Q14201 252 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 SWSAP1Q6NVH7 229 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 NPAS4Q8IUM7 802 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 CCDC60Q8IWA6 550 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 ZBTB10Q96DT7 871 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 PLVAPQ9BX97 442 aa22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 RNF216Q9NWF9 866 aaPredicted RBP22.65■■□□□ 1.22
UBE2D3-220ENST00000505307 NCK2O43639 380 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 PSAPP07602 524 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 TMEM62Q0P6H9 643 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 PUS10Q3MIT2 529 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 RUFY3Q7L099 469 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 BBXQ8WY36 941 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 C1QTNF1Q9BXJ1 281 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 SLC26A6Q9BXS9 759 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 NSUN3Q9H649 340 aaKnown RBP22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 PCDHA10Q9Y5I2 948 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 MAFBQ9Y5Q3 323 aaPredicted RBP22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 RALGAPA2Q2PPJ7 1873 aa22.64■■□□□ 1.21
UBE2D3-220ENST00000505307 USP11P51784 963 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 PRR16Q569H4 304 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 CKAP2LQ8IYA6 745 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 TRIM22Q8IYM9 498 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 CMTR2Q8IYT2 770 aaKnown RBP22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 KIAA0319LQ8IZA0 1049 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 CRIPAKQ8N1N5 446 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 LINC01599Q8WXQ3 324 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 C22orf23Q9BZE7 217 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 ZSWIM6Q9HCJ5 1215 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 CEP131Q9UPN4 1083 aa22.63■■□□□ 1.21
UBE2D3-220ENST00000505307 LINC00271P0C7V0 271 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms