RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 SNX1Q13596 522 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 C6orf118Q5T5N4 469 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 ZNF662Q6ZS27 426 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 MYOCDQ8IZQ8 938 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 ENAHQ8N8S7 591 aaPredicted RBP9.36□□□□□ -0.91
CCDC149-204ENST00000504487 TEKT4Q8WW24 435 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 TRIM51Q9BSJ1 452 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 EPB41L4AQ9HCS5 686 aaPredicted RBP9.36□□□□□ -0.91
CCDC149-204ENST00000504487 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CCDC149-204ENST00000504487 CACNA1FO60840 1977 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 FOXP2O15409 715 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 HLA-DOAP06340 250 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 OR52Z1P0C646 297 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 TNFRSF8P28908 595 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ZNF76P36508 570 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 PMS2P54278 862 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ZBTB16Q05516 673 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ALKBH5Q6P6C2 394 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ZNF449Q6P9G9 518 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 MREGQ8N565 214 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 STMN2Q93045 179 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SCOCQ9UIL1 159 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SPATA31A5Q5VU36 1347 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SPATA31A7Q8IWB4 1347 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SSU72P8A0A1W2PR75 194 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 TCP11X1B4DZS4 312 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 WNT7AO00755 349 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 MGRN1O60291 552 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 GSTA1P08263 222 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 GNAQP50148 359 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ALDH5A1P51649 535 aaPredicted RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 KCNJ2P63252 427 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CDK17Q00537 523 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 DR1Q01658 176 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 TFAP4Q01664 338 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ALX1Q15699 326 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 HERC4Q5GLZ8 1057 aaPredicted RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SLF2Q8IX21 1173 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 NAF1Q96HR8 494 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CUEDC2Q9H467 287 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 USP15Q9Y4E8 981 aaPredicted RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 SRRM3A6NNA2 597 aaPredicted RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CRELD2Q6UXH1 353 aaPredicted RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 FAM47EQ6ZV65 393 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CCT6BQ92526 530 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 ANKS1AQ92625 1134 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CCDC77Q9BR77 488 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 TRIM9Q9C026 710 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 CNOT8Q9UFF9 292 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
CCDC149-204ENST00000504487 MINPP1Q9UNW1 487 aa9.35□□□□□ -0.91
CCDC149-204ENST00000504487 EME2A4GXA9 379 aaPredicted RBP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ANKRD62A6NC57 917 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 DRD4P21917 467 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 PRPHP41219 470 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 MSH2P43246 934 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 GRM1Q13255 1194 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 NONOQ15233 471 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 NAB2Q15742 525 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 FIGNQ5HY92 759 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ANKRD20A2Q5SQ80 823 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ANKRD20A1Q5TYW2 823 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ANKRD20A3Q5VUR7 823 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 C6orf89Q6UWU4 347 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 TMTC3Q6ZXV5 915 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 NKX2-3Q8TAU0 364 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 DUSP9Q99956 384 aaKnown RBP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 LBHD1Q9BQE6 289 aaPredicted RBP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 C6orf50Q9HD87 102 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ABCF3Q9NUQ8 709 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 CEP72Q9P209 647 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 NARFQ9UHQ1 456 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 SCAF8Q9UPN6 1271 aaKnown RBP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 COL4A3BPQ9Y5P4 624 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 MYH8P13535 1937 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 EPHB6O15197 1021 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 BAG6P46379 1132 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 GSTO1P78417 241 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 LLGL1Q15334 1064 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 PDCD2Q16342 344 aaPredicted RBP9.34□□□□□ -0.91
CCDC149-204ENST00000504487 SPRED3Q2MJR0 410 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 DEFB132Q7Z7B7 95 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 ERICH1Q86X53 443 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 PTPN22Q9Y2R2 807 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 A0A087X0T9 212 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 DCDC2CA8MYV0 355 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 FAM228BP0C875 321 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 RASSF2P50749 326 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 VPS72Q15906 364 aa9.34□□□□□ -0.91
CCDC149-204ENST00000504487 SLC18A3Q16572 532 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms