RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 VPS36Q86VN1 386 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 SFR1Q86XK3 245 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 ACTRT1Q8TDG2 376 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 CRYGNQ8WXF5 182 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 REEP2Q9BRK0 252 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 TAF1DQ9H5J8 278 aaPredicted RBP20.26■□□□□ 0.83
LINC00461-203ENST00000504246 NAGPAQ9UK23 515 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 FBXL5Q9UKA1 691 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 CPP00450 1065 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 RPL13P26373 211 aaKnown RBP20.26■□□□□ 0.83
LINC00461-203ENST00000504246 NOP2P46087 812 aaKnown RBP20.26■□□□□ 0.83
LINC00461-203ENST00000504246 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
LINC00461-203ENST00000504246 Q4G0T1 1027 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 PRR16Q569H4 304 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 EMC10Q5UCC4 262 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 TADA2BQ86TJ2 420 aa20.26■□□□□ 0.83
LINC00461-203ENST00000504246 MEIS2O14770 477 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 SLC16A3O15427 465 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 RAD21O60216 631 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 RNASE9P60153 205 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 CUL1Q13616 776 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 BMT2Q1RMZ1 405 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 ALKBH5Q6P6C2 394 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 HHIPL2Q6UWX4 724 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 KLHL7Q8IXQ5 586 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 SH2D3CQ8N5H7 860 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 MKL1Q969V6 931 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 CALR3Q96L12 384 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 ISCUQ9H1K1 167 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 TYW1Q9NV66 732 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 FAM169AQ9Y6X4 670 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 HSPA9P38646 679 aaKnown RBP20.25■□□□□ 0.83
LINC00461-203ENST00000504246 PDCLQ13371 301 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 SLFN13Q68D06 897 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 KCTD16Q68DU8 428 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 LRRC57Q8N9N7 239 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 LMBR1Q8WVP7 490 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 FAM20AQ96MK3 541 aa20.25■□□□□ 0.83
LINC00461-203ENST00000504246 PSMC6P62333 389 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 EPHA7Q15375 998 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 DCAF17Q5H9S7 520 aaPredicted RBP20.24■□□□□ 0.83
LINC00461-203ENST00000504246 TTC19Q6DKK2 380 aaPredicted RBP20.24■□□□□ 0.83
LINC00461-203ENST00000504246 SCFD2Q8WU76 684 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 ZC3H12CQ9C0D7 883 aaKnown RBP20.24■□□□□ 0.83
LINC00461-203ENST00000504246 NYAP2Q9P242 653 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 HMGB1P1B2RPK0 211 aaPredicted RBP20.24■□□□□ 0.83
LINC00461-203ENST00000504246 MEIS1O00470 390 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 CEP104O60308 925 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 ZEB2O60315 1214 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 SPATA31C1P0DKV0 1188 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
LINC00461-203ENST00000504246 HOXD13P35453 343 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 SCNN1DP51172 638 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 B4GALNT4Q76KP1 1039 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 AMNQ9BXJ7 453 aa20.24■□□□□ 0.83
LINC00461-203ENST00000504246 KLRG2A4D1S0 409 aaPredicted RBP20.23■□□□□ 0.83
LINC00461-203ENST00000504246 PGRMC1O00264 195 aaKnown RBP20.23■□□□□ 0.83
LINC00461-203ENST00000504246 NDUFAB1O14561 156 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 AKAP3O75969 853 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 FOSP01100 380 aaPredicted RBP20.23■□□□□ 0.83
LINC00461-203ENST00000504246 NR3C1P04150 777 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 NR1D1P20393 614 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 PACS2Q86VP3 889 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 ATP6V1G3Q96LB4 118 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 INTUQ9ULD6 942 aa20.23■□□□□ 0.83
LINC00461-203ENST00000504246 A0A0A6YYK5 440 aaPredicted RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 SPDYE3A6NKU9 549 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 TBCAO75347 108 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 ATP1A2P50993 1020 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 HLTFQ14527 1009 aaKnown RBP eCLIP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 TCERG1LQ5VWI1 586 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 APOBEC3HQ6NTF7 200 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 LRIG3Q6UXM1 1119 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 TPCN2Q8NHX9 752 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 NENFQ9UMX5 172 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 ASTN1O14525 1302 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 GTPBP10A4D1E9 387 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 GOLGA6L10A6NI86 522 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 CCDC188H7C350 402 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 H2AFZP0C0S5 128 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 SREBF1P36956 1147 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 JAM2P57087 298 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 DDR1Q08345 913 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 H2AFVQ71UI9 128 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 SPATS2Q86XZ4 545 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 SYCE1Q8N0S2 351 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 LENG9Q96B70 501 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 RABEP2Q9H5N1 569 aa20.22■□□□□ 0.83
LINC00461-203ENST00000504246 ATXN2Q99700 1313 aaKnown RBP20.22■□□□□ 0.83
LINC00461-203ENST00000504246 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
LINC00461-203ENST00000504246 NFIAQ12857 509 aa20.21■□□□□ 0.83
LINC00461-203ENST00000504246 MAATS1Q7Z4T9 603 aa20.21■□□□□ 0.83
LINC00461-203ENST00000504246 KCTD17Q8N5Z5 321 aa20.21■□□□□ 0.83
LINC00461-203ENST00000504246 LRRC45Q96CN5 670 aa20.21■□□□□ 0.83
LINC00461-203ENST00000504246 RNPC3Q96LT9 517 aaKnown RBP20.21■□□□□ 0.83
LINC00461-203ENST00000504246 DNAJC18Q9H819 358 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms