RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 POTEBQ6S5H4 581 aa26.22■■□□□ 1.79
SSBP2-203ENST00000504174 NPAS4Q8IUM7 802 aa26.22■■□□□ 1.79
SSBP2-203ENST00000504174 CELF4Q9BZC1 486 aaKnown RBP26.22■■□□□ 1.79
SSBP2-203ENST00000504174 TTC3P53804 2025 aa26.22■■□□□ 1.79
SSBP2-203ENST00000504174 SMIM35A0A1B0GVV1 85 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 GOLGA8AA7E2F4 631 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 GOLGA8BA8MQT2 603 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 EXOSC10Q01780 885 aaKnown RBP26.21■■□□□ 1.79
SSBP2-203ENST00000504174 CMTR2Q8IYT2 770 aaKnown RBP26.21■■□□□ 1.79
SSBP2-203ENST00000504174 TRAPPC12Q8WVT3 735 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 C11orf16Q9NQ32 467 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 BARHL2Q9NY43 387 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 PRKAG3Q9UGI9 489 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 BRPF3Q9ULD4 1205 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 PADI3Q9ULW8 664 aa26.21■■□□□ 1.79
SSBP2-203ENST00000504174 IGSF9BQ9UPX0 1349 aa26.2■■□□□ 1.79
SSBP2-203ENST00000504174 ATG2AQ2TAZ0 1938 aa26.2■■□□□ 1.79
SSBP2-203ENST00000504174 STXBP3O00186 592 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 MEIS1O00470 390 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 ATG7O95352 703 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 MMP1P03956 469 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 SREBF1P36956 1147 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 KRT76Q01546 638 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 FUT2Q10981 343 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 ITGB3BPQ13352 177 aaPredicted RBP26.2■■□□□ 1.78
SSBP2-203ENST00000504174 KRT32Q14532 448 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 FAM160B1Q5W0V3 765 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 MTHFD1LQ6UB35 978 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 NIPA1Q7RTP0 329 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 LINC01599Q8WXQ3 324 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 P2RX5Q93086 422 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 PPP2R3CQ969Q6 453 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 TCEANC2Q96MN5 208 aa26.2■■□□□ 1.78
SSBP2-203ENST00000504174 KLF18A0A0U1RQI7 1052 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 BACH1O14867 736 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 NAALADL2Q58DX5 795 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 FAM43BQ6ZT52 329 aaPredicted RBP26.19■■□□□ 1.78
SSBP2-203ENST00000504174 TMEM260Q9NX78 707 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 LRFN2Q9ULH4 789 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 NAP1L2Q9ULW6 460 aaPredicted RBP26.19■■□□□ 1.78
SSBP2-203ENST00000504174 LOXHD1Q8IVV2 1947 aa26.19■■□□□ 1.78
SSBP2-203ENST00000504174 KDM3AQ9Y4C1 1321 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 DDX39AO00148 427 aaKnown RBP26.18■■□□□ 1.78
SSBP2-203ENST00000504174 HBP1O60381 514 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 HMGB1P09429 215 aaKnown RBP26.18■■□□□ 1.78
SSBP2-203ENST00000504174 SCG2P13521 617 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 FGD1P98174 961 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 HYAL1Q12794 435 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 TSGA10IPQ3SY00 556 aa26.18■■□□□ 1.78
SSBP2-203ENST00000504174 RTN4RL1Q86UN2 441 aaPredicted RBP26.18■■□□□ 1.78
SSBP2-203ENST00000504174 ALG13Q9NP73 1137 aaKnown RBP26.18■■□□□ 1.78
SSBP2-203ENST00000504174 MRPL42Q9Y6G3 142 aaKnown RBP26.18■■□□□ 1.78
SSBP2-203ENST00000504174 PRR33A8MZF0 331 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 CSPG5O95196 566 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 KLRC1P26715 233 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 CLK2P49760 499 aaKnown RBP26.17■■□□□ 1.78
SSBP2-203ENST00000504174 RCAN1P53805 252 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 CSPP1Q1MSJ5 1256 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 CTC1Q2NKJ3 1217 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 ODR4Q5SWX8 454 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 PLA2G4DQ86XP0 818 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 ADHFE1Q8IWW8 467 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 IGFLR1Q9H665 355 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 RNF216Q9NWF9 866 aaPredicted RBP26.17■■□□□ 1.78
SSBP2-203ENST00000504174 PLAGL2Q9UPG8 496 aa26.17■■□□□ 1.78
SSBP2-203ENST00000504174 IGKV6D-21A0A0A0MT36 114 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 LTBRP36941 435 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 ZP2Q05996 745 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 NFX1Q12986 1120 aaKnown RBP26.16■■□□□ 1.78
SSBP2-203ENST00000504174 ADCK5Q3MIX3 580 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 PAN2Q504Q3 1202 aaKnown RBP26.16■■□□□ 1.78
SSBP2-203ENST00000504174 MIS18BP1Q6P0N0 1132 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 ABHD15Q6UXT9 468 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 CRIPAKQ8N1N5 446 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 ATP8B4Q8TF62 1192 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 ZNF302Q9NR11 478 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 COL1A2P08123 1366 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 KIAA1671Q9BY89 1806 aa26.16■■□□□ 1.78
SSBP2-203ENST00000504174 CCDC196A0A1B0GTZ2 297 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 CCNE2O96020 404 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 JAKMIP3Q5VZ66 844 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 MCTP2Q6DN12 878 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 PDXDC2PQ6P474 469 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 UPF3BQ9BZI7 483 aaKnown RBP26.15■■□□□ 1.78
SSBP2-203ENST00000504174 GINS2Q9Y248 185 aa26.15■■□□□ 1.78
SSBP2-203ENST00000504174 DCXO43602 365 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 CDC27P30260 824 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 METAP2P50579 478 aaKnown RBP eCLIP26.14■■□□□ 1.78
SSBP2-203ENST00000504174 CLUL1Q15846 466 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 PFKFB3Q16875 520 aaPredicted RBP26.14■■□□□ 1.78
SSBP2-203ENST00000504174 TMEM266Q2M3C6 531 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 ZNF484Q5JVG2 852 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 RASEFQ8IZ41 740 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 CCDC12Q8WUD4 166 aaPredicted RBP26.14■■□□□ 1.78
SSBP2-203ENST00000504174 POP1Q99575 1024 aaKnown RBP26.14■■□□□ 1.78
SSBP2-203ENST00000504174 TCEAL9Q9UHQ7 104 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 PCDHB7Q9Y5E2 793 aa26.14■■□□□ 1.78
SSBP2-203ENST00000504174 IPO5O00410 1097 aaKnown RBP26.13■■□□□ 1.77
SSBP2-203ENST00000504174 CDC45O75419 566 aa26.13■■□□□ 1.77
SSBP2-203ENST00000504174 RPS6KA5O75582 802 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms