RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SMYD2Q9NRG4 433 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 PCDHA6Q9UN73 950 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 PCDHA8Q9Y5H6 950 aa17.82■□□□□ 0.44
PCDHA1-203ENST00000504120 CIAPIN1Q6FI81 312 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 MIGA2Q7L4E1 593 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 EFCAB13Q8IY85 973 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 SDCCAG3Q96C92 435 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 LRGUKQ96M69 825 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 ALDH8A1Q9H2A2 487 aaPredicted RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 MINPP1Q9UNW1 487 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 TNS3Q68CZ2 1445 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 STX1BP61266 288 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 KSR1Q8IVT5 923 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 C7orf31Q8N865 590 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 CALR3Q96L12 384 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 CLTCQ00610 1675 aaKnown RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 CD58P19256 250 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 ATP8B3O60423 1300 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 USP17L5A8MUK1 530 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 TUBB6Q9BUF5 446 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 ZMYND12Q9H0C1 365 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 LY9Q9HBG7 655 aa17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.81■□□□□ 0.44
PCDHA1-203ENST00000504120 TTC4O95801 387 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 CYP2D6P10635 497 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ZKSCAN8Q15776 578 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 RNF207Q6ZRF8 634 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 TTC36A6NLP5 189 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 GH2P01242 217 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 RFC1P35251 1148 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ARMCX2Q7L311 632 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 EXOC1LA0A1B0GW35 172 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 HMGB1P1B2RPK0 211 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ZSCAN20P17040 1043 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 C6orf118Q5T5N4 469 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 C4orf50Q6ZRC1 276 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 AP1M1Q9BXS5 423 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ABCB6Q9NP58 842 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 NARFQ9UHQ1 456 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 TLK1Q9UKI8 766 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 RRP15Q9Y3B9 282 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 PTPRMP28827 1452 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 MIF4GDA9UHW6 222 aaKnown RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 PEX3P56589 373 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 SIX6OS1Q8N1H7 587 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ENAHQ8N8S7 591 aaPredicted RBP17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 RAD54LQ92698 747 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
PCDHA1-203ENST00000504120 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 PODXLO00592 558 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 NR1D1P20393 614 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 PRDX5P30044 214 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 HEXIM2Q96MH2 286 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 FAM20AQ96MK3 541 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 NOVA2Q9UNW9 492 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 ESYT2A0FGR8 921 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 IREB2P48200 963 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 ADCY2Q08462 1091 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 RCN2Q14257 317 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 FAM182BQ5T319 152 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 DNAJC12Q9UKB3 198 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 RC3H1Q5TC82 1133 aaKnown RBP17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 SCYL3Q8IZE3 742 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 PLEKHG2Q9H7P9 1386 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 ANO9A1A5B4 782 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 CRKP46108 304 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 SLCO1A2P46721 670 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 PRELPP51888 382 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 SEMA3FQ13275 785 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 GRM4Q14833 912 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 TBC1D9BQ66K14 1250 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 CENPUQ71F23 418 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 ERICH1Q86X53 443 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 PDIK1LQ8N165 341 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
PCDHA1-203ENST00000504120 IPO5O00410 1097 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 MCPH1Q8NEM0 835 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 GPR101Q96P66 508 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 DCP1AQ9NPI6 582 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 LCMT1Q9UIC8 334 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 UTYO14607 1347 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 FGGP02679 453 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 OSTNP61366 133 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 ARHGEF6Q15052 776 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 LLGL1Q15334 1064 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 SKA2Q8WVK7 121 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 MID2Q9UJV3 735 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 SLC7A5Q01650 507 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 THOC5Q13769 683 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms