RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 LCP1P13796 627 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 SDSP20132 328 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 PTH1RQ03431 593 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 USP39Q53GS9 565 aaKnown RBP6.33□□□□□ -1.4
UBE3D-205ENST00000503942 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 DHX37Q8IY37 1157 aaKnown RBP6.33□□□□□ -1.4
UBE3D-205ENST00000503942 DTX3Q8N9I9 347 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 DCAF4Q8WV16 495 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 SCLYQ96I15 445 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 AJUBAQ96IF1 538 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 TRIM8Q9BZR9 551 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 RBPJLQ9UBG7 517 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 PLAAQ9Y263 795 aa6.33□□□□□ -1.4
UBE3D-205ENST00000503942 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
UBE3D-205ENST00000503942 MCM7P33993 719 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 MASP1P48740 699 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 TM4SF20Q53R12 229 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
UBE3D-205ENST00000503942 BRAPQ7Z569 592 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 FGD2Q7Z6J4 655 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 NIM1KQ8IY84 436 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 IFNL2Q8IZJ0 200 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 GIMAP8Q8ND71 665 aaPredicted RBP6.32□□□□□ -1.4
UBE3D-205ENST00000503942 RCBTB1Q8NDN9 531 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
UBE3D-205ENST00000503942 PHF20Q9BVI0 1012 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 SLKQ9H2G2 1235 aaPredicted RBP6.32□□□□□ -1.4
UBE3D-205ENST00000503942 DLL4Q9NR61 685 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 NDOR1Q9UHB4 597 aa6.32□□□□□ -1.4
UBE3D-205ENST00000503942 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
UBE3D-205ENST00000503942 KNG1P01042 644 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 COMTP21964 271 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 CSF2RBP32927 897 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 LTBRP36941 435 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
UBE3D-205ENST00000503942 RSPO2Q6UXX9 243 aaPredicted RBP6.31□□□□□ -1.4
UBE3D-205ENST00000503942 TTLL11Q8NHH1 800 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 CSRNP2Q9H175 543 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 GPR27Q9NS67 375 aa6.31□□□□□ -1.4
UBE3D-205ENST00000503942 A0A087X0B3 334 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 FAM83GA6ND36 823 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 EFCAB14O75071 495 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 DGKIO75912 1065 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 LSAMPQ13449 338 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 AGBL4Q5VU57 503 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 VASNQ6EMK4 673 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 EXTL1Q92935 676 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 MFSD3Q96ES6 412 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 IFT57Q9NWB7 429 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 PRKAB1Q9Y478 270 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 PCDHA2Q9Y5H9 948 aa6.3□□□□□ -1.4
UBE3D-205ENST00000503942 RASGRP1O95267 797 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 CRTAMO95727 393 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 INHBCP55103 352 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
UBE3D-205ENST00000503942 GPR85P60893 370 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 LSM12Q3MHD2 195 aaKnown RBP6.29□□□□□ -1.4
UBE3D-205ENST00000503942 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 GPR155Q7Z3F1 870 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 FILIP1Q7Z7B0 1213 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 TAX1BP1Q86VP1 789 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 REXO1L1PQ8IX06 675 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 NEIL1Q96FI4 390 aaPredicted RBP6.29□□□□□ -1.4
UBE3D-205ENST00000503942 ZFYVE21Q9BQ24 234 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 ASH2LQ9UBL3 628 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 PCDHA9Q9Y5H5 950 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 PCDHA8Q9Y5H6 950 aa6.29□□□□□ -1.4
UBE3D-205ENST00000503942 TCRBV16S1A1N1A0A5B0 115 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 AQP7O14520 342 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 MAFKO60675 156 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 DGCR2P98153 550 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
UBE3D-205ENST00000503942 LBX2Q6XYB7 198 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 THNSL2Q86YJ6 484 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 IFNL3Q8IZI9 196 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 KATNBL1Q9H079 304 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 CDIP1Q9H305 208 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 SPC25Q9HBM1 224 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
UBE3D-205ENST00000503942 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
UBE3D-205ENST00000503942 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
UBE3D-205ENST00000503942 TNPO3Q9Y5L0 923 aaKnown RBP6.28□□□□□ -1.4
UBE3D-205ENST00000503942 GSG1L2A8MUP6 293 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 PLSCR1O15162 318 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 DNAJC6O75061 913 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 RAD17O75943 681 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 VIL1P09327 827 aaKnown RBP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 MYCLP1P12525 358 aaPredicted RBP6.27□□□□□ -1.41
UBE3D-205ENST00000503942 KCNA6P17658 529 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 ZNF460Q14592 562 aa6.27□□□□□ -1.41
UBE3D-205ENST00000503942 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms